RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 GSTA5Q7RTV2 222 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 CUZD1Q86UP6 607 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 HMGCLL1Q8TB92 370 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 PPP4R1Q8TF05 950 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 SLCO2A1Q92959 643 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 C5orf34Q96MH7 638 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 ZNF285Q96NJ3 590 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 MIPEPQ99797 713 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 LHPPQ9H008 270 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 SOX17Q9H6I2 414 aaPredicted RBP12.56□□□□□ -0.4
SPG7-221ENST00000569720 EPS8L2Q9H6S3 715 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 ENAMQ9NRM1 1142 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 TREX1Q9NSU2 369 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 SPATA7Q9P0W8 599 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 PCDHGA10Q9Y5H3 936 aa12.56□□□□□ -0.4
SPG7-221ENST00000569720 CTAGE15A4D2H0 777 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 H3BMM5 538 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 FANCGO15287 622 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ZSCAN5DPP0CG00 497 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CTAGE8P0CG41 777 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 RNF224P0DH78 156 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ERVK-10P10266 1014 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 NMBRP28336 390 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 BDKRB1P46663 353 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 OR1D4P47884 311 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CRADDP78560 199 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 OCA2Q04671 838 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 HIF1AQ16665 826 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 GLE1Q53GS7 698 aaKnown RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 RNF187Q5TA31 235 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 PRMT9Q6P2P2 845 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CNSTQ6PJW8 725 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 KIRREL2Q6UWL6 708 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 SHISA6Q6ZSJ9 500 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 COX15Q7KZN9 410 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 MAATS1Q7Z4T9 603 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CTAGE6Q86UF2 777 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CTAGE4Q8IX94 777 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 PARP9Q8IXQ6 854 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 METTL27Q8N6F8 245 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 OR2L3Q8NG85 312 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 DNAJB14Q8TBM8 379 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 INPP5DQ92835 1189 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CRB3Q9BUF7 120 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ZBTB20Q9HC78 741 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 ZNF304Q9HCX3 659 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 CTSFQ9UBX1 484 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ZC3H7BQ9UGR2 993 aaKnown RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 PCYOX1Q9UHG3 505 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 ERRFI1Q9UJM3 462 aaPredicted RBP12.55□□□□□ -0.4
SPG7-221ENST00000569720 KLK4Q9Y5K2 254 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 HS3ST3B1Q9Y662 390 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 NFS1Q9Y697 457 aa12.55□□□□□ -0.4
SPG7-221ENST00000569720 HEATR5BQ9P2D3 2071 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 HYKKA2RU49 373 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CTSVO60911 334 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 PHF2O75151 1096 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 ALOX12BO75342 701 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 VPS26AO75436 327 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 VAPBO95292 243 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 EIF2S1P05198 315 aaKnown RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 PSMB5P28074 263 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CMPK1P30085 196 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 FMO4P31512 558 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CDK16Q00536 496 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 DHX34Q14147 1143 aaKnown RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 MUM1Q2TAK8 710 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CCSMST1Q4G0I0 132 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 IGFL2Q6UWQ7 119 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 LURAP1LQ8IV03 231 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 TMEM151BQ8IW70 566 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 ST6GALNAC3Q8NDV1 305 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 SPATA4Q8NEY3 305 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 MAGOHBQ96A72 148 aaKnown RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 MIEF2Q96C03 454 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 THOC3Q96J01 351 aaKnown RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 CNDP1Q96KN2 507 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 TCF12Q99081 682 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 ZNF282Q9UDV7 671 aaPredicted RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 NOVA2Q9UNW9 492 aaKnown RBP12.54□□□□□ -0.4
SPG7-221ENST00000569720 MAU2Q9Y6X3 613 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 CACNA1DQ01668 2161 aa12.54□□□□□ -0.4
SPG7-221ENST00000569720 ITPR2Q14571 2701 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 WIPF3A6NGB9 483 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 MAP2K7O14733 419 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 PRPF4O43172 522 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■□□□ 13.2
SPG7-221ENST00000569720 LDLRP01130 860 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 ESR1P03372 595 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 ACPPP15309 386 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 PAMP19021 973 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 CHRM3P20309 590 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 FBLP22087 321 aaKnown RBP12.53□□□□□ -0.4
SPG7-221ENST00000569720 MGAT1P26572 445 aa12.53□□□□□ -0.4
SPG7-221ENST00000569720 ATP5DP30049 168 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms