RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 SPINK2P20155 84 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 HIST1H2ADP20671 130 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 CRHR1P34998 444 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ETV5P41161 510 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 GRIA3P42263 894 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 GDF5P43026 501 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 GABRA4P48169 554 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 HSPA7P48741 367 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 SH3BP2P78314 561 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TARDBPQ13148 414 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH13-208ENST00000566333 KCNAB1Q14722 419 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 SNAP47Q5SQN1 464 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 CACHD1Q5VU97 1274 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 PRAMEF9Q5VWM5 478 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ICE2Q659A1 982 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 FCRL6Q6DN72 434 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 SULT1C3Q6IMI6 304 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ZNF425Q6IV72 752 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ARMC6Q6NXE6 501 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 LCTLQ6UWM7 567 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 EXOC3L1Q86VI1 746 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TCAIMQ8N3R3 496 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 GALNT15Q8N3T1 639 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ATL1Q8WXF7 558 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 ESAMQ96AP7 390 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TLCD1Q96CP7 247 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 MED8Q96G25 268 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 PRR11Q96HE9 360 aaPredicted RBP7.86□□□□□ -1.15
CDH13-208ENST00000566333 HIST1H2AHQ96KK5 128 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TMEM74Q96NL1 305 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TRAPPC9Q96Q05 1148 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 HIST1H2AJQ99878 128 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 EGFL8Q99944 293 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 H2AFJQ9BTM1 129 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TRIM54Q9BYV2 358 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 VIPAS39Q9H9C1 493 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 TMBIM4Q9HC24 238 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 C1GALT1Q9NS00 363 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 WWOXQ9NZC7 414 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 CD274Q9NZQ7 290 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 SENP1Q9P0U3 644 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 CPSF2Q9P2I0 782 aaKnown RBP7.86□□□□□ -1.15
CDH13-208ENST00000566333 SLC17A7Q9P2U7 560 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 PCDHB11Q9Y5F2 797 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 DSPP15924 2871 aaKnown RBP7.86□□□□□ -1.15
CDH13-208ENST00000566333 SCN3AQ9NY46 2000 aa7.86□□□□□ -1.15
CDH13-208ENST00000566333 PKD1L2Q7Z442 2459 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CCDC187A0A096LP49 1063 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 MED19A0JLT2 244 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 PABPN1LA6NDY0 278 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 A8MU76 341 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 G3V2L1 256 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 H3BMH7 237 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 AGRPO00253 132 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 COPEO14579 308 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 DLX3O60479 287 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CTSVO60911 334 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SPAG7O75391 227 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 WDR47O94967 919 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 FKBP9O95302 570 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 SIX3O95343 332 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 ZBTB11O95625 1053 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 CTSBP07858 339 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 RPS17P08708 135 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 MSL3P1P0C860 447 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 MYZAPP0CAP1 466 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 EBLN1P0CF75 366 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CDH1P12830 882 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CCL4P13236 92 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 FOLR1P15328 257 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 NPPBP16860 134 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ITIH1P19827 911 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CDH3P22223 829 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CCND1P24385 295 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 RPA3P35244 121 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 ETV4P43268 484 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PPM1FP49593 454 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 SEPHS1P49903 392 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 ALDH18A1P54886 795 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 PRDX1Q06830 199 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 TSTA3Q13630 321 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 E2F2Q14209 437 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PCLAFQ15004 111 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PFKFB4Q16877 469 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 DEFB110Q30KQ9 67 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 TTMPQ5BVD1 217 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 C3orf38Q5JPI3 329 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CAPN13Q6MZZ7 669 aaPredicted RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 ZYG11AQ6WRX3 759 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 RNF44Q7L0R7 432 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 LRRC70Q7Z2Q7 622 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 HDXQ7Z353 690 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 CROCCP2Q86T23 111 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 THOC6Q86W42 341 aaKnown RBP7.85□□□□□ -1.15
CDH13-208ENST00000566333 PAQR7Q86WK9 346 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 KMT5CQ86Y97 462 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 D2HGDHQ8N465 521 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 FBXO39Q8N4B4 442 aa7.85□□□□□ -1.15
CDH13-208ENST00000566333 PTGR2Q8N8N7 351 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms