RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 CATSPEREQ5SY80 951 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 SLCO4C1Q6ZQN7 724 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 C17orf64Q86WR6 236 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 FAM46DQ8NEK8 389 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 LMX1AQ8TE12 382 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 SELENOMQ8WWX9 145 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PTCD3Q96EY7 689 aaKnown RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 POT1Q9NUX5 634 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 SPASTQ9UBP0 616 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 GOLGA4Q13439 2230 aaKnown RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 B4DGG1 531 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PEX11AO75192 247 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 VIPP01282 170 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 GNSP15586 552 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 LBPP18428 481 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 VARSP26640 1264 aaKnown RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PSMB5P28074 263 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 DMTNQ08495 405 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 NR6A1Q15406 480 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 FRG2Q64ET8 278 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 RNF165Q6ZSG1 346 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 GKN2Q86XP6 184 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 HMGCLL1Q8TB92 370 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 ZDHHC1Q8WTX9 485 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 JPH3Q8WXH2 748 aaPredicted RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 USP7Q93009 1102 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 MTFMTQ96DP5 389 aaKnown RBP21.2■□□□□ 0.98
LINC01960-201ENST00000563759 FRG2BQ96QU4 278 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 EFCAB11Q9BUY7 163 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 PRM3Q9NNZ6 103 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 CAPN7Q9Y6W3 813 aa21.2■□□□□ 0.98
LINC01960-201ENST00000563759 A0A1B0GTW7 788 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 RGS14O43566 566 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 CBX6O95503 412 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 PDYNP01213 254 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 CDH1P12830 882 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 BNIP1Q12981 228 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 PAGE2BQ5JRK9 111 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 ATG9BQ674R7 924 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 AMIGO1Q86WK6 493 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 FBXL6Q8N531 539 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 EHD1Q9H4M9 534 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 SLC40A1Q9NP59 571 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 TXLNGQ9NUQ3 528 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 CPNE7Q9UBL6 633 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 COPG1Q9Y678 874 aaKnown RBP21.19■□□□□ 0.98
LINC01960-201ENST00000563759 LAMA1P25391 3075 aa21.19■□□□□ 0.98
LINC01960-201ENST00000563759 A0A1B0GVT2 93 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 A0A1W2PPV9 198 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 CAPN14A8MX76 684 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SLC28A1O00337 649 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 C1GALT1C1LP0DN25 315 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 XRCC1P18887 633 aaPredicted RBP21.18■□□□□ 0.98
LINC01960-201ENST00000563759 CASP2P42575 452 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 PLK5Q496M5 336 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 CHSY3Q70JA7 882 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 CEP68Q76N32 757 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 TREML1Q86YW5 311 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 NAGSQ8N159 534 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SFRP1Q8N474 314 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 ZNF548Q8NEK5 533 aaPredicted RBP21.18■□□□□ 0.98
LINC01960-201ENST00000563759 OR4E2Q8NGC2 313 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SLC37A2Q8TED4 501 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 MRGBPQ9NV56 204 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 ARL8BQ9NVJ2 186 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SLC12A4Q9UP95 1085 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 NEK2P51955 445 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 STX1BP61266 288 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 E2F2Q14209 437 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 GPR18Q14330 331 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SLBPQ14493 270 aaKnown RBP eCLIP21.18■□□□□ 0.98
LINC01960-201ENST00000563759 KRT72Q14CN4 511 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 LACTB2Q53H82 288 aaPredicted RBP21.18■□□□□ 0.98
LINC01960-201ENST00000563759 NXPE4Q6UWF7 544 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 Q6ZSR9 355 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 TRIM46Q7Z4K8 759 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 REPS1Q96D71 796 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 WDR34Q96EX3 536 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SRMSQ9H3Y6 488 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 ZNF385DQ9H6B1 395 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 OR6C2Q9NZP2 312 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 SUSD2Q9UGT4 822 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 PCDHB11Q9Y5F2 797 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 PCDHGA11Q9Y5H2 935 aa21.18■□□□□ 0.98
LINC01960-201ENST00000563759 H0YIV9 168 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 AQP9O43315 295 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 HRO43593 1189 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 PRR35P0CG20 571 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 HMGCS1Q01581 520 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 DDX39BQ13838 428 aaKnown RBP21.17■□□□□ 0.98
LINC01960-201ENST00000563759 HIST2H2ACQ16777 129 aaPredicted RBP21.17■□□□□ 0.98
LINC01960-201ENST00000563759 ICE2Q659A1 982 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 HIST2H2AA3Q6FI13 130 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 OGFOD2Q6N063 350 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 MED27Q6P2C8 311 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 SLC9B2Q86UD5 537 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 SFTPA2Q8IWL1 248 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 FNDC5Q8NAU1 212 aa21.17■□□□□ 0.98
LINC01960-201ENST00000563759 GEMIN8Q9NWZ8 242 aaKnown RBP21.17■□□□□ 0.98
LINC01960-201ENST00000563759 CABIN1Q9Y6J0 2220 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms