RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 CHTF18Q8WVB6 975 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 KRT35Q92764 455 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 MIPEPQ99797 713 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 C19orf43Q9BQ61 176 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 RAB11FIP5Q9BXF6 653 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 LRRC40Q9H9A6 602 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 RIC8BQ9NVN3 520 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 TRPC4Q9UBN4 977 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CACNA1CQ13936 2221 aa10.01□□□□□ -0.81
CDC42BPB-207ENST00000560492 CCDC162PA2VCL2 907 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 VSTM2BA6NLU5 285 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR1I1O60431 355 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 WDPCPO95876 746 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 CELA2AP08217 269 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ANXA5P08758 320 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 COX6A1P12074 109 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 MST1P26927 711 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 PSMB5P28074 263 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 SSTR2P30874 369 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 PPARGP37231 505 aaPredicted RBP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 MAGEA1P43355 309 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 NAP1L1P55209 391 aaKnown RBP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 PMP22Q01453 160 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 MUM1Q2TAK8 710 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 MFSD4BQ5TF39 518 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ZNF324BQ6AW86 544 aaPredicted RBP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 FRMPD2BQ6IN97 320 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 HIBCHQ6NVY1 386 aaPredicted RBP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 PRMT9Q6P2P2 845 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 PACS1Q6VY07 963 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 SLC22A15Q8IZD6 547 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR6P1Q8NGX9 317 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR2L8Q8NGY9 312 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 DNAJB8Q8NHS0 232 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ASZ1Q8WWH4 475 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 TRIM56Q9BRZ2 755 aaKnown RBP10□□□□□ -0.81
CDC42BPB-207ENST00000560492 OSBPL8Q9BZF1 889 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ARNT2Q9HBZ2 717 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ABI3Q9P2A4 366 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 TINAGQ9UJW2 476 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 ANAPC5Q9UJX4 755 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 INTUQ9ULD6 942 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
CDC42BPB-207ENST00000560492 A8MUI8 341 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 IDSB3KWA1 339 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 RASGRF2O14827 1237 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 PJA2O43164 708 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 PRPF4O43172 522 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 SRPX2O60687 465 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 SLC19A2O60779 497 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 DIAPH2O60879 1101 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 CTSVO60911 334 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 MFAP3LO75121 409 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 BMP10O95393 424 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 SERPINA7P05543 415 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 ITGAMP11215 1152 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 CCR7P32248 378 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 FOXN2P32314 431 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 BDKRB1P46663 353 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 GCGRP47871 477 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 AP2B1P63010 937 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 PRAMEP78395 509 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 MSLNQ13421 630 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 FASTKD1Q53R41 847 aaKnown RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 PTRHD1Q6GMV3 140 aaKnown RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 AFTPHQ6ULP2 937 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 UNC5DQ6UXZ4 953 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 PPP1R21Q6ZMI0 780 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 NEK10Q6ZWH5 1172 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 CDH24Q86UP0 819 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 VRK3Q8IV63 474 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 KRT222Q8N1A0 295 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 OTUD6BQ8N6M0 293 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 HAS2Q92819 552 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 HDAC10Q969S8 669 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 MTFMTQ96DP5 389 aaKnown RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 MMABQ96EY8 250 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 ACAT2Q9BWD1 397 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 TRIM8Q9BZR9 551 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 TSPAN10Q9H1Z9 355 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 TEKT2Q9UIF3 430 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 TTC7AQ9ULT0 858 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 CDC14AQ9UNH5 594 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 TACC2O95359 2948 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 SCN2AQ99250 2005 aa9.99□□□□□ -0.81
CDC42BPB-207ENST00000560492 LOC105369274A0A096LPK9 316 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 IGHV1-45A0A0A0MS14 117 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 LOC102723532A0A0G2JNH3 316 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 OR5H15A6NDH6 313 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 GOLGA6L9A6NEM1 432 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 IQCF5A8MTL0 148 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 TARM1B6A8C7 271 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 PRAMEF2O60811 474 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 VPS26AO75436 327 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 TJP3O95049 919 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 MED26O95402 600 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 MLYCDO95822 493 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 ONECUT2O95948 504 aa9.98□□□□□ -0.81
CDC42BPB-207ENST00000560492 GOT2P00505 430 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms