RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 EPB41L4BQ9H329 900 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 ANKZF1Q9H8Y5 726 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SYTL2Q9HCH5 934 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 PDE7BQ9NP56 450 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 ENAMQ9NRM1 1142 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 FGF21Q9NSA1 209 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 STOX2Q9P2F5 926 aaPredicted RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 NOVA2Q9UNW9 492 aaKnown RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 SDK2Q58EX2 2172 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SNRNP200O75643 2136 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 IGKV1-8A0A0C4DH67 115 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 TARM1B6A8C7 271 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 CDC7O00311 574 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 RRP8O43159 456 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 PHGDHO43175 533 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 STK17BO94768 372 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 ACSL3O95573 720 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 CTSBP07858 339 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 ABHD2P08910 425 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 MYBL2P10244 700 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 LIPCP11150 499 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 MAGP20916 626 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 MAP4P27816 1152 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 PSMB5P28074 263 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 TNFRSF8P28908 595 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 PHBP35232 272 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 ARL4DP49703 201 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 RAB10P61026 200 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 USP10Q14694 798 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 SF1Q15637 639 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 TMTC4Q5T4D3 741 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 PWWP2BQ6NUJ5 590 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 FIGLAQ6QHK4 219 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 SUSD1Q6UWL2 747 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 MBOAT1Q6ZNC8 495 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 PPP1R3BQ86XI6 285 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 RAB42Q8N4Z0 105 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 NKAPQ8N5F7 415 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 OR2L3Q8NG85 312 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 OR8K5Q8NH50 307 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 OR1L3Q8NH93 324 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 MCOLN3Q8TDD5 553 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 KCNE4Q8WWG9 221 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 SLC44A1Q8WWI5 657 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 SMPDL3AQ92484 453 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 NKD1Q969G9 470 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 ZUFSPQ96AP4 578 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 TSPAN17Q96FV3 270 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 NAF1Q96HR8 494 aaKnown RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 ZNF285Q96NJ3 590 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 DERL2Q9GZP9 239 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.28□□□□□ -0.92
SRP54-210ENST00000556380 TXNDC16Q9P2K2 825 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 RARRES3Q9UL19 164 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 KLHL20Q9Y2M5 609 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 PCDHB11Q9Y5F2 797 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 PIEZO2Q9H5I5 2752 aa9.28□□□□□ -0.92
SRP54-210ENST00000556380 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 ZNF839A8K0R7 811 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 STMND1H3BQB6 276 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 KLK10O43240 276 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 RIPK2O43353 540 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 RAD1O60671 282 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 CTSVO60911 334 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 SLC35E2BP0CK96 405 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 CYP2A7P20853 494 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 GCAP28676 217 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 CRABP2P29373 138 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 PMS2P54278 862 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 AP1S2P56377 157 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 PRDX1Q06830 199 aaKnown RBP9.27□□□□□ -0.93
SRP54-210ENST00000556380 DLG1Q12959 904 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 SRSF6Q13247 344 aaKnown RBP9.27□□□□□ -0.93
SRP54-210ENST00000556380 MAP7Q14244 749 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 TEX35Q5T0J7 233 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 PRAMEF17Q5VTA0 474 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 ZNF425Q6IV72 752 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 FBXO42Q6P3S6 717 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 AGTRAPQ6RW13 159 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 TRMT10CQ7L0Y3 403 aaKnown RBP9.27□□□□□ -0.93
SRP54-210ENST00000556380 CMC1Q7Z7K0 106 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 MCATQ8IVS2 390 aaKnown RBP9.27□□□□□ -0.93
SRP54-210ENST00000556380 SLC38A9Q8NBW4 561 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 PPFIBP2Q8ND30 876 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 OR56A3Q8NH54 315 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 ISL2Q96A47 359 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 MIPEPQ99797 713 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 DHRS4Q9BTZ2 278 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 SGPP1Q9BX95 441 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 AKIRIN1Q9H9L7 192 aaPredicted RBP9.27□□□□□ -0.93
SRP54-210ENST00000556380 GPAMQ9HCL2 828 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 SLC6A20Q9NP91 592 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 SOHLH2Q9NX45 425 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 CFAP46Q8IYW2 2715 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 ADAMTS20P59510 1910 aa9.27□□□□□ -0.93
SRP54-210ENST00000556380 ATRXP46100 2492 aa9.26□□□□□ -0.93
SRP54-210ENST00000556380 A0A087WUV0 522 aaPredicted RBP9.26□□□□□ -0.93
SRP54-210ENST00000556380 TEX51A0A1B0GUA7 166 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms