RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 EZRP15311 586 aaKnown RBP11.33□□□□□ -0.6
VRK1-204ENST00000555351 ALAS2P22557 587 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 RPA3P35244 121 aaPredicted RBP11.33□□□□□ -0.6
VRK1-204ENST00000555351 PAFAH1B1P43034 410 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 RGS4P49798 205 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 CCL11P51671 97 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 GNG11P61952 73 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 DR1Q01658 176 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 TAP2Q03519 686 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 DHX9Q08211 1270 aaKnown RBP11.33□□□□□ -0.6
VRK1-204ENST00000555351 SP140Q13342 867 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 WASHC2DQ5SRD0 308 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 C1orf189Q5VU69 101 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 CPZQ66K79 652 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 ZNF425Q6IV72 752 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 TTLL10Q6ZVT0 673 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 TAX1BP1Q86VP1 789 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 FAM20CQ8IXL6 584 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 ZNF480Q8WV37 535 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 CERS2Q96G23 380 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 PKP4Q99569 1192 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 GPR21Q99679 349 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 SMAD5Q99717 465 aaKnown RBP11.33□□□□□ -0.6
VRK1-204ENST00000555351 SLC30A3Q99726 388 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 PLCD4Q9BRC7 762 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 DPH7Q9BTV6 452 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 MRPS30Q9NP92 439 aaKnown RBP11.33□□□□□ -0.6
VRK1-204ENST00000555351 SLC22A11Q9NSA0 550 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 TAS2R13Q9NYV9 303 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 KLHL20Q9Y2M5 609 aa11.33□□□□□ -0.6
VRK1-204ENST00000555351 MYO18BQ8IUG5 2567 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 BSNQ9UPA5 3926 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 HYKKA2RU49 373 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 K7EM74 188 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PCDH17O14917 1159 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 SLC16A5O15375 505 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PRPF4O43172 522 aaKnown RBP eCLIP11.32□□□□□ -0.6
VRK1-204ENST00000555351 DPM1O60762 260 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 DNAJB5O75953 348 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 C8GP07360 202 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 UMODP07911 640 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 ITGAXP20702 1163 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 MMP11P24347 488 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 VARSP26640 1264 aaKnown RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 PSMB5P28074 263 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 CD97P48960 835 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 VSX2P58304 361 aaPredicted RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 ATP1A4Q13733 1029 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 FASTKQ14296 549 aaKnown RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 KCTD19Q17RG1 926 aaPredicted RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 MUM1Q2TAK8 710 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PRTGQ2VWP7 1150 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 GARNL3Q5VVW2 1013 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 ICE2Q659A1 982 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 STEAP4Q687X5 459 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 HIBCHQ6NVY1 386 aaPredicted RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 FBXO42Q6P3S6 717 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PAQR7Q86WK9 346 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 CLEC1AQ8NC01 280 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 MCOLN3Q8TDD5 553 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 CCDC138Q96M89 665 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PCBD2Q9H0N5 130 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 IARS2Q9NSE4 1012 aaKnown RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 GPR83Q9NYM4 423 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 TRMT6Q9UJA5 497 aaKnown RBP11.32□□□□□ -0.6
VRK1-204ENST00000555351 CDC14AQ9UNH5 594 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 SEC16AO15027 2179 aa11.32□□□□□ -0.6
VRK1-204ENST00000555351 PCM1Q15154 2024 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 VSTM2BA6NLU5 285 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 AGPSO00116 658 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 CNOT3O75175 753 aaKnown RBP11.31□□□□□ -0.6
VRK1-204ENST00000555351 IPO13O94829 963 aaKnown RBP11.31□□□□□ -0.6
VRK1-204ENST00000555351 SEC31AO94979 1220 aaKnown RBP11.31□□□□□ -0.6
VRK1-204ENST00000555351 AHSGP02765 367 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 PDGFAP04085 211 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 ALPPP05187 535 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 ERVK-10P10266 1014 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 NR1D1P20393 614 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 CCND1P24385 295 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 OTX2P32243 289 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 MPP1Q00013 466 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 MYBPC3Q14896 1274 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 NKG7Q16617 165 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 HIF1AQ16665 826 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 MSS51Q4VC12 460 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 VWA5B1Q5TIE3 1220 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 FRMPD2BQ6IN97 320 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 UBE2R2Q712K3 238 aaPredicted RBP11.31□□□□□ -0.6
VRK1-204ENST00000555351 COX15Q7KZN9 410 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 PPP1R32Q7Z5V6 425 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 PALM2Q8IXS6 379 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 LRRC56Q8IYG6 542 aaPredicted RBP11.31□□□□□ -0.6
VRK1-204ENST00000555351 FDCSPQ8NFU4 85 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
VRK1-204ENST00000555351 THAP11Q96EK4 314 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms