RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 XKR7Q5GH72 579 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 CATSPEREQ5SY80 951 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 METTL21CQ5VZV1 264 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 NXNQ6DKJ4 435 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 IL27RAQ6UWB1 636 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 SCIMPQ6UWF3 145 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 RNF165Q6ZSG1 346 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 LARP4Q71RC2 724 aaKnown RBP eCLIP13.28□□□□□ -0.285e-6■■■□□ 16.1
APEX1-205ENST00000553555 SLC9B2Q86UD5 537 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 OR4E2Q8NGC2 313 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 SLC37A2Q8TED4 501 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 SLC5A11Q8WWX8 675 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 PRR11Q96HE9 360 aaPredicted RBP13.28□□□□□ -0.28
APEX1-205ENST00000553555 EHD1Q9H4M9 534 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 DOLKQ9UPQ8 538 aa13.28□□□□□ -0.28
APEX1-205ENST00000553555 ATP6AP2A0A1C7CYW4 349 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 E9PBE3 544 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 LMO7DNF2Z398 122 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 FCHO1O14526 889 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 KLHL41O60662 606 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 VPS4BO75351 444 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ULK1O75385 1050 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ATP6AP2O75787 350 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 KRT6AP02538 564 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 KRT6BP04259 564 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 RXRGP48443 463 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 KRT6CP48668 564 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
APEX1-205ENST00000553555 GPR18Q14330 331 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ABRAXAS2Q15018 415 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ZRSR2Q15696 482 aaKnown RBP13.27□□□□□ -0.29
APEX1-205ENST00000553555 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ATG9BQ674R7 924 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 AMIGO1Q86WK6 493 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 JPH3Q8WXH2 748 aaPredicted RBP13.27□□□□□ -0.29
APEX1-205ENST00000553555 CCT6BQ92526 530 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 USP7Q93009 1102 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 PTCD3Q96EY7 689 aaKnown RBP13.27□□□□□ -0.29
APEX1-205ENST00000553555 ACAT2Q9BWD1 397 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 NMUR2Q9GZQ4 415 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 AKTIPQ9H8T0 292 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 UCKL1Q9NWZ5 548 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 OR6C2Q9NZP2 312 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 TAC3Q9UHF0 121 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 ZFP69BQ9UJL9 534 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 SNX6Q9UNH7 406 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 PCDHGA2Q9Y5H1 932 aa13.27□□□□□ -0.29
APEX1-205ENST00000553555 USP34Q70CQ2 3546 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 B4DGG1 531 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 SDC3O75056 442 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 ANXA6P08133 673 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 PSMB5P28074 263 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 YBX1P67809 324 aaKnown RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 BNIP3Q12983 259 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 OGFOD3Q6PK18 319 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 Q6ZSR9 355 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 CLNKQ7Z7G1 428 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 C17orf64Q86WR6 236 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 RBM12BQ8IXT5 1001 aaKnown RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 ADGRF3Q8IZF5 1079 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 OR2A1Q8NGT9 310 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 OR2T11Q8NH01 316 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 ERP27Q96DN0 273 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 MTFMTQ96DP5 389 aaKnown RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 ELF4Q99607 663 aaPredicted RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 TWSG1Q9GZX9 223 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 SRMSQ9H3Y6 488 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 SAR1AQ9NR31 198 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 FARSBQ9NSD9 589 aaKnown RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 ZNF490Q9ULM2 529 aaPredicted RBP13.26□□□□□ -0.29
APEX1-205ENST00000553555 TRIM33Q9UPN9 1127 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 CSNK1G3Q9Y6M4 447 aa13.26□□□□□ -0.29
APEX1-205ENST00000553555 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 ZNF318Q5VUA4 2279 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 SERTM1A2A2V5 107 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 H0YIV9 168 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 SLC28A1O00337 649 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 BTN3A3O00478 584 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 NOBOXO60393 691 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 PDYNP01213 254 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 CHRM5P08912 532 aaPredicted RBP13.25□□□□□ -0.29
APEX1-205ENST00000553555 PRR35P0CG20 571 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 CDH1P12830 882 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 NCF2P19878 526 aaPredicted RBP13.25□□□□□ -0.29
APEX1-205ENST00000553555 PEBP1P30086 187 aaKnown RBP13.25□□□□□ -0.29
APEX1-205ENST00000553555 HOXD12P35452 270 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 DPP6P42658 865 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 PRDX1Q06830 199 aaKnown RBP13.25□□□□□ -0.29
APEX1-205ENST00000553555 LAPTM5Q13571 262 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 SHBQ15464 509 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 DUOXA1Q1HG43 343 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 DEFB133Q30KQ1 61 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 SGO1Q5FBB7 561 aa13.25□□□□□ -0.29
APEX1-205ENST00000553555 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.25□□□□□ -0.29
APEX1-205ENST00000553555 FRG2Q64ET8 278 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms