RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 SGCBQ16585 318 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 CARD16Q5EG05 197 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 MSANTD1Q6ZTZ1 278 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 TSTD1Q8NFU3 115 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 RC3H2Q9HBD1 1191 aaKnown RBP12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 DNAJB9Q9UBS3 223 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 GNB5O14775 395 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 RNF220Q5VTB9 566 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 SCGB3A2Q96PL1 93 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 B3GAT2Q9NPZ5 323 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 CFL2Q9Y281 166 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
RAB3IP-212ENST00000550536 CYP17A1P05093 508 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 EIF2S3P41091 472 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TMEM164Q5U3C3 297 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 PCDH19Q8TAB3 1148 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 FAM84AQ96KN4 292 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 RIMKLBQ9ULI2 386 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 C5orf51A6NDU8 294 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CDC7O00311 574 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 NR2C1P13056 603 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 PGAM2P15259 253 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CYP1B1Q16678 543 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 SLC10A6Q3KNW5 377 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 LRRC58Q96CX6 371 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 DPYSL5Q9BPU6 564 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 SLC6A15Q9H2J7 730 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 BRD7Q9NPI1 651 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 OXSMQ9NWU1 459 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 H0YGN5 161 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CHAF1BQ13112 559 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 SLBPQ14493 270 aaKnown RBP eCLIP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 FBXO43Q4G163 708 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 C2orf27AQ580R0 203 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 DHRS1Q96LJ7 313 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 KCNC2Q96PR1 638 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CXorf21Q9HAI6 301 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 ZNF99A8MXY4 864 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 LRRTM4Q86VH4 590 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CHERPQ8IWX8 916 aaKnown RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TTYH1Q9H313 450 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 FBXO9Q9UK97 447 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 POFUT2Q9Y2G5 429 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 IMPDH1P20839 514 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 SMSP52788 366 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 KLF1Q13351 362 aaPredicted RBP12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 GPR68Q15743 365 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CLEC20AQ6ZU45 233 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 PRSS58Q8IYP2 241 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CAMKVQ8NCB2 501 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 CYB5D2Q8WUJ1 264 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 TMEM109Q9BVC6 243 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 UTS2RQ9UKP6 389 aa12.21□□□□□ -0.45
RAB3IP-212ENST00000550536 FOXO6A8MYZ6 492 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 CYP11A1P05108 521 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 GSTM3P21266 225 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 HERC3Q15034 1050 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PHF19Q5T6S3 580 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PRAMEF17Q5VTA0 474 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PNPLA2Q96AD5 504 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 ASB9Q96DX5 294 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 SUV39H2Q9H5I1 410 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF224Q9NZL3 707 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 CDC14AQ9UNH5 594 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PCDHB11Q9Y5F2 797 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 ITGA10O75578 1167 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 APLP1P51693 650 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 MADCAM1Q13477 382 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 LRRC32Q14392 662 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 RALGPS1Q5JS13 557 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 EGFLAMQ63HQ2 1017 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 IRF2BP1Q8IU81 584 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 KLK6Q92876 244 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 TOP1MTQ969P6 601 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 TESCQ96BS2 214 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 ZFP3Q96NJ6 502 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 EPYCQ99645 322 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 COL20A1Q9P218 1284 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 PCDHGB2Q9Y5G2 931 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 INHAP05111 366 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF227Q86WZ6 799 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 CARS2Q9HA77 564 aaKnown RBP12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 SNTG1Q9NSN8 517 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 C14orf105Q9NVL8 296 aa12.21□□□□□ -0.46
RAB3IP-212ENST00000550536 NPIPA5E9PKD4 350 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 NUAK1O60285 661 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ATP1B2P14415 290 aaPredicted RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 THOC7Q6I9Y2 204 aaKnown RBP12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 CYP2S1Q96SQ9 504 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 ZNF69Q9UC07 566 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 FZD4Q9ULV1 537 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 NPIPA1Q9UND3 350 aa12.2□□□□□ -0.46
RAB3IP-212ENST00000550536 RLN2P04090 185 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms