RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 SLC22A4Q9H015 551 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 C11orf54Q9H0W9 315 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 CCSER2Q9H7U1 834 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 WASH6PQ9NQA3 447 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 UXTQ9UBK9 157 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 PSORS1C1Q9UIG5 152 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 ARPC4-TTLL3A0A0A6YYG9 625 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 TRAV19A0A0A6YYK7 116 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 GJB3O75712 270 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 PGRP06401 933 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 CHRM5P08912 532 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 VLDLRP98155 873 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 NBPF12Q5TAG4 269 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 GPSM1Q86YR5 675 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 SLC44A2Q8IWA5 706 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 FBXO16Q8IX29 292 aaPredicted RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 ASB15Q8WXK1 588 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 MTFMTQ96DP5 389 aaKnown RBP12.34□□□□□ -0.43
SMG8-202ENST00000543872 ASPNQ9BXN1 380 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 FAM83DQ9H4H8 585 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 REEP1Q9H902 201 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 SCPEP1Q9HB40 452 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 SPASTQ9UBP0 616 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 PGAP2Q9UHJ9 254 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 CLCA3PQ9Y6N3 262 aa12.34□□□□□ -0.43
SMG8-202ENST00000543872 RECQL4O94761 1208 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 RETP07949 1114 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 RAB25P57735 213 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 NKX3-2P78367 333 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 KCTD2Q14681 263 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 QPRTQ15274 297 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
SMG8-202ENST00000543872 SIRPB2Q5JXA9 342 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 KDELC1Q6UW63 502 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 LIX1Q8N485 282 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 PAF1Q8N7H5 531 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 R3HDMLQ9H3Y0 253 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 FAM124BQ9H5Z6 455 aaPredicted RBP12.33□□□□□ -0.44
SMG8-202ENST00000543872 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 OGDHLQ9ULD0 1010 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 B4DXG7 233 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 GFRA2O00451 464 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 F9P00740 461 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 C1QCP02747 245 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 CDK1P06493 297 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 FPR1P21462 350 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 OAZ1P54368 228 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 AIF1P55008 147 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 RHAGQ02094 409 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 UBE3AQ05086 875 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 SLC10A7Q0GE19 358 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 KYAT1Q16773 422 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 RUNDC3AQ59EK9 446 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 ZNF605Q86T29 641 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 CDH24Q86UP0 819 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 OR10T2Q8NGX3 314 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 TRMT61AQ96FX7 289 aaKnown RBP12.33□□□□□ -0.44
SMG8-202ENST00000543872 AARSD1Q9BTE6 412 aaKnown RBP12.33□□□□□ -0.44
SMG8-202ENST00000543872 HEBP1Q9NRV9 189 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 THUMPD1Q9NXG2 353 aaKnown RBP12.33□□□□□ -0.44
SMG8-202ENST00000543872 PCDHGA6Q9Y5G7 932 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 MYLKQ15746 1914 aa12.33□□□□□ -0.44
SMG8-202ENST00000543872 A0A0B4J293 547 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 J3KR12 359 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 SLC9A3R1O14745 358 aaPredicted RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 SCAMP3O14828 347 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 STX7O15400 261 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 EGFRP00533 1210 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 ZNF250P15622 560 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 RPS19P39019 145 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 TAF6P49848 677 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 GZMKP49863 264 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 DGKEP52429 567 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 CLVS2Q5SYC1 327 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PLPPR4Q7Z2D5 763 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 SETD6Q8TBK2 473 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 RNF31Q96EP0 1072 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 TOE1Q96GM8 510 aaKnown RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 MSANTD3Q96H12 275 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 INPP5KQ9BT40 448 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 RNF121Q9H920 327 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 ABCB9Q9NP78 766 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 SLC23A1Q9UHI7 598 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 CLCA1A8K7I4 914 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 CD72P21854 359 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 RUNX1T1Q06455 604 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 IHHQ14623 411 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 PTPRNQ16849 979 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 C10orf62Q5T681 223 aaPredicted RBP12.32□□□□□ -0.44
SMG8-202ENST00000543872 FKBP1CQ5VVH2 108 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 OR8H3Q8N146 312 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 DNAJC22Q8N4W6 341 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 OR4F6Q8NGB9 312 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 GMLQ99445 158 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 MGLLQ99685 303 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 SLC25A51Q9H1U9 297 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 MAGIXQ9H6Y5 334 aa12.32□□□□□ -0.44
SMG8-202ENST00000543872 FARSBQ9NSD9 589 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms