RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 LINC00854A0A1B0GVQ3 168 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 RGS10O43665 173 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 PCDHGA12O60330 932 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 FKBP9O95302 570 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 NPPAP01160 153 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 ABCB1P08183 1280 aaPredicted RBP13.83□□□□□ -0.2
PRAME-214ENST00000543184 ALOX12P18054 663 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 TNFRSF1BP20333 461 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 MSH3P20585 1137 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 LPOP22079 712 aaPredicted RBP13.83□□□□□ -0.2
PRAME-214ENST00000543184 GADD45AP24522 165 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 TGFBR2P37173 567 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 DSC1Q08554 894 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 MADCAM1Q13477 382 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 RTP2Q5QGT7 225 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 DEPDC1Q5TB30 811 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 ZCCHC8Q6NZY4 707 aaKnown RBP13.83□□□□□ -0.2
PRAME-214ENST00000543184 FKBP9P1Q75LS8 142 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 GPR149Q86SP6 731 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 RHOXF1Q8NHV9 184 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 DNASE1L2Q92874 299 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 TPD52L3Q96J77 140 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 KCNC2Q96PR1 638 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 SEPT5Q99719 369 aaPredicted RBP13.83□□□□□ -0.2
PRAME-214ENST00000543184 EBPLQ9BY08 206 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 PDFQ9HBH1 243 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 C1orf109Q9NX04 203 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 MARCH5Q9NX47 278 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 OPTCQ9UBM4 332 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 RAI2Q9Y5P3 530 aa13.83□□□□□ -0.2
PRAME-214ENST00000543184 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
PRAME-214ENST00000543184 CA3P07451 260 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 BCKDHAP12694 445 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 ACVR2AP27037 513 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 HTR7P34969 479 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 BMPR1AP36894 532 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 EIF2DP41214 584 aaKnown RBP13.82□□□□□ -0.2
PRAME-214ENST00000543184 TOP3AQ13472 1001 aaPredicted RBP13.82□□□□□ -0.2
PRAME-214ENST00000543184 OR4F3Q6IEY1 312 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 NLGN4XQ8N0W4 816 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 CCDC115Q96NT0 180 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TRIM62Q9BVG3 475 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TP63Q9H3D4 680 aaPredicted RBP13.82□□□□□ -0.2
PRAME-214ENST00000543184 DUSP21Q9H596 190 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 LRTM1Q9HBL6 345 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 WWOXQ9NZC7 414 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 SPATA7Q9P0W8 599 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TMED5Q9Y3A6 229 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 IGLV3-10A0A075B6K4 115 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 M0QZQ0 153 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 SLC16A6O15403 523 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 INSIG1O15503 277 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 ULK1O75385 1050 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TACR2P21452 398 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 GKP32189 559 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 RYKP34925 604 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TAF1AQ15573 450 aaPredicted RBP13.82□□□□□ -0.2
PRAME-214ENST00000543184 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 CYP27C1Q4G0S4 372 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TSPAN18Q96SJ8 248 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 ROGDIQ9GZN7 287 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 TPK1Q9H3S4 243 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 FBXO8Q9NRD0 319 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 C14orf119Q9NWQ9 140 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 SCN3BQ9NY72 215 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 ERVK-11Q9UQG0 969 aa13.82□□□□□ -0.2
PRAME-214ENST00000543184 AP3D1O14617 1153 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SCELO95171 688 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 HSMCR30P0CW71 290 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SERPINB10P48595 397 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 ARHGEF7Q14155 803 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 ATXN7L2Q5T6C5 722 aaPredicted RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 PTRHD1Q6GMV3 140 aaKnown RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 PDE12Q6L8Q7 609 aaKnown RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 RSPO2Q6UXX9 243 aaPredicted RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 REXO5Q96IC2 774 aaKnown RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 Q96MT0 163 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 RDH12Q96NR8 316 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 CWH43Q9H720 699 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SERHLQ9NQF3 203 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 KIF17Q9P2E2 1029 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 PPT2Q9UMR5 302 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SLC6A14Q9UN76 642 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 TPRKBQ9Y3C4 175 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 BOLA1Q9Y3E2 137 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 SAMHD1Q9Y3Z3 626 aaKnown RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 PCDHB9Q9Y5E1 797 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 ADAM12O43184 909 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 WBP4O75554 376 aaKnown RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 HOXB8P17481 243 aaPredicted RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 GNPDA1P46926 289 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 PPP5CP53041 499 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 COPZ1P61923 177 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 PARP15Q460N3 678 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.81□□□□□ -0.2
PRAME-214ENST00000543184 SYT6Q5T7P8 510 aaPredicted RBP13.81□□□□□ -0.2
PRAME-214ENST00000543184 UBE2UQ5VVX9 321 aa13.81□□□□□ -0.2
PRAME-214ENST00000543184 AKAP14Q86UN6 197 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms