RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 SLC6A20Q9NP91 592 aa20.05■□□□□ 0.8
OTUB1-211ENST00000543004 HMGB1P1B2RPK0 211 aaPredicted RBP20.04■□□□□ 0.8
OTUB1-211ENST00000543004 MATN2O00339 956 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 IPO13O94829 963 aaKnown RBP20.04■□□□□ 0.8
OTUB1-211ENST00000543004 EPORP19235 508 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 MAGP20916 626 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 SDHBP21912 280 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 CDH3P22223 829 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 SEPHS1P49903 392 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 HES3Q5TGS1 186 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 CACHD1Q5VU97 1274 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 CDCP2Q5VXM1 449 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 RBM44Q6ZP01 1051 aaKnown RBP20.04■□□□□ 0.8
OTUB1-211ENST00000543004 KLHDC8AQ8IYD2 350 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 MGARPQ8TDB4 240 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 SLC22A18Q96BI1 424 aa20.04■□□□□ 0.8
OTUB1-211ENST00000543004 NSUN5Q96P11 429 aaKnown RBP20.04■□□□□ 0.8
OTUB1-211ENST00000543004 SPTBN2O15020 2390 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 SLC9B1P1A6NJY1 282 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 H3BQF6 201 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 E2F3O00716 465 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 THRAP10827 490 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 TSPAN8P19075 237 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 ALDH3A1P30838 453 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 PRKAA2P54646 552 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 NFKB2Q00653 900 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 PRDX1Q06830 199 aaKnown RBP20.03■□□□□ 0.8
OTUB1-211ENST00000543004 ZIC1Q15915 447 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 SLC5A12Q1EHB4 618 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 PHF19Q5T6S3 580 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 LCTLQ6UWM7 567 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 MDM1Q8TC05 714 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 NEIL2Q969S2 332 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 CNOT10Q9H9A5 744 aaKnown RBP20.03■□□□□ 0.8
OTUB1-211ENST00000543004 PDP2Q9P2J9 529 aa20.03■□□□□ 0.8
OTUB1-211ENST00000543004 A0A0J9YY10 115 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 WDR91A4D1P6 747 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 TLCD2A6NGC4 264 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 STX16-NPEPL1H3BU86 382 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 STX16O14662 325 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 TM9SF1O15321 606 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 PRAMEF4O60810 478 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 MT-CO3P00414 261 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 CCND1P24385 295 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 GRIA3P42263 894 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 WDR4P57081 412 aaKnown RBP20.02■□□□□ 0.8
OTUB1-211ENST00000543004 ZFP36L1Q07352 338 aaKnown RBP20.02■□□□□ 0.8
OTUB1-211ENST00000543004 PCBP2Q15366 365 aaKnown RBP eCLIP20.02■□□□□ 0.82e-7■■□□□ 13.3
OTUB1-211ENST00000543004 CATSPEREQ5SY80 951 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 PRAMEF9Q5VWM5 478 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 TEX9Q8N6V9 391 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 SNX31Q8N9S9 440 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 WDR48Q8TAF3 677 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 RDH11Q8TC12 318 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 TRAPPC9Q96Q05 1148 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 MRPS30Q9NP92 439 aaKnown RBP20.02■□□□□ 0.8
OTUB1-211ENST00000543004 DNAJC11Q9NVH1 559 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 OXSMQ9NWU1 459 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 OPTCQ9UBM4 332 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 PCTPQ9UKL6 214 aa20.02■□□□□ 0.8
OTUB1-211ENST00000543004 MDC1Q14676 2089 aaKnown RBP20.02■□□□□ 0.79
OTUB1-211ENST00000543004 FAM149AA5PLN7 773 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 E7EQ34 232 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 K7EPI3 171 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 ZWINTO95229 277 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 CDH1P12830 882 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 CDH13P55290 713 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 UNC50Q53HI1 259 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 ZNF678Q5SXM1 525 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 FAM219BQ5XKK7 198 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 FCRL6Q6DN72 434 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 ARHGAP22Q7Z5H3 698 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 DPH7Q9BTV6 452 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 ZBTB26Q9HCK0 441 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 C1GALT1Q9NS00 363 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 TMCO1Q9UM00 188 aa20.02■□□□□ 0.79
OTUB1-211ENST00000543004 H7BY64 318 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 PPP6CO00743 305 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 RPS17P08708 135 aaKnown RBP20.01■□□□□ 0.79
OTUB1-211ENST00000543004 DHRS4L1P0CG22 281 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 IMPDH1P20839 514 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 CMPK1P30085 196 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 HOXD11P31277 338 aaPredicted RBP20.01■□□□□ 0.79
OTUB1-211ENST00000543004 CCR10P46092 362 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 SERPINB4P48594 390 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 INHBCP55103 352 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 HERVK_113P63132 956 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 MEF2AQ02078 507 aaPredicted RBP20.01■□□□□ 0.79
OTUB1-211ENST00000543004 CDC16Q13042 620 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 KCNAB1Q14722 419 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 C16orf72Q14CZ0 275 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 PDK4Q16654 411 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 CLPPQ16740 277 aaPredicted RBP20.01■□□□□ 0.79
OTUB1-211ENST00000543004 LRRC70Q7Z2Q7 622 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 GOLGA7Q7Z5G4 137 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 C17orf64Q86WR6 236 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 PRR11Q96HE9 360 aaPredicted RBP20.01■□□□□ 0.79
OTUB1-211ENST00000543004 PRAP1Q96NZ9 151 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 CD180Q99467 661 aa20.01■□□□□ 0.79
OTUB1-211ENST00000543004 PAIP2Q9BPZ3 127 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms