RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 MYH6P13533 1939 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 A0A1W2PRX2 142 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 MAGEA13PA6NCF6 341 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 HSBP1L1C9JCN9 74 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 KLRF2D3W0D1 207 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 FAM229AH3BQW9 127 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 SMIM22K7EJ46 135 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 NVLO15381 856 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 MAGEB2O15479 319 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 YKT6O15498 198 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 PSPNO60542 156 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 SUN1O94901 812 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ZWINTO95229 277 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 IL1BP01584 269 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 KRT14P02533 472 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ASNSP08243 561 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 DANCRP0C864 163 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 PLA2G4BP0C869 781 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 CKMT2P17540 419 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 AKT2P31751 481 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 CSTF2P33240 577 aaKnown RBP eCLIP5.35□□□□□ -1.55
DDB1-219ENST00000541513 CDKN1BP46527 198 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 IER3P46695 156 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ZNF75DP51815 510 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 CNN1P51911 297 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 CCNHP51946 323 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 MAP3K7CLP57077 242 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 HNRNPKP61978 463 aaKnown RBP eCLIP5.35□□□□□ -1.55
DDB1-219ENST00000541513 GALK2Q01415 458 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 PPP1R8Q12972 351 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 RESTQ13127 1097 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 PPIL2Q13356 520 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 MAB21L1Q13394 359 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 LAMB3Q13751 1172 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 VGLL4Q14135 290 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 NECTIN1Q15223 517 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RBBP5Q15291 538 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 CPSF6Q16630 551 aaKnown RBP eCLIP5.35□□□□□ -1.55
DDB1-219ENST00000541513 DECR1Q16698 335 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 CERKLQ49MI3 558 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 LRRC38Q5VT99 294 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RNF43Q68DV7 783 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RGMBQ6NW40 437 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RPTNQ6XPR3 784 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ZNF813Q6ZN06 617 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 PAQR9Q6ZVX9 377 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 MOB2Q70IA6 237 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RNF144BQ7Z419 303 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 NANOGNBQ7Z5D8 188 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 LUZP1Q86V48 1076 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 GPR180Q86V85 440 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 COMTD1Q86VU5 262 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ERO1BQ86YB8 467 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 FAM114A1Q8IWE2 563 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 LAS2Q8IYD9 372 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 ADGRF3Q8IZF5 1079 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 SLC44A5Q8NCS7 719 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 OR8J1Q8NGP2 316 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RAB3IL1Q8TBN0 382 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 UBLCP1Q8WVY7 318 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 OIT3Q8WWZ8 545 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 TMIGD2Q96BF3 282 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RRNAD1Q96FB5 475 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 IFT74Q96LB3 600 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 LRFN5Q96NI6 719 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 CLIC6Q96NY7 704 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 OSBPL9Q96SU4 736 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 TRPV6Q9H1D0 765 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RNF41Q9H4P4 317 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 SFXN1Q9H9B4 322 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 SAP30LQ9HAJ7 183 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 RRAGDQ9NQL2 400 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 KLHL1Q9NR64 748 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 FAM120CQ9NX05 1096 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 TUBA8Q9NY65 449 aaPredicted RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 CNOT2Q9NZN8 540 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 FZD1Q9UP38 647 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 FAM96BQ9Y3D0 163 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 HCFC2Q9Y5Z7 792 aa5.35□□□□□ -1.55
DDB1-219ENST00000541513 BAZ2BQ9UIF8 2168 aaKnown RBP5.35□□□□□ -1.55
DDB1-219ENST00000541513 A0A1B0GTQ1 180 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 OR6C74A6NCV1 312 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 WRBO00258 174 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 DSCR3O14972 297 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 CTDSPLO15194 276 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 OGTO15294 1046 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 TSPAN1O60635 241 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PRAMEF11O60813 436 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 JRKO75564 520 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 GCATO75600 419 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ZNF202O95125 648 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 F13BP05160 661 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 RPA2P15927 270 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ZNF3P17036 446 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 ITGAXP20702 1163 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 DUSP1P28562 367 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 TYK2P29597 1187 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 PTGER1P34995 402 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 MAP2K2P36507 400 aa5.34□□□□□ -1.55
DDB1-219ENST00000541513 MAGEA1P43355 309 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms