RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 AKTIPQ9H8T0 292 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 EML4Q9HC35 981 aaKnown RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 ZFP14Q9HCL3 533 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 ZNF304Q9HCX3 659 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 PAK6Q9NQU5 681 aaPredicted RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 GREB1Q4ZG55 1949 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 TRIM77I1YAP6 450 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 RECQL5O94762 991 aaPredicted RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 AZGP1P25311 298 aaKnown RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 ISL1P61371 349 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 PLIN5Q00G26 463 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 CDK5R2Q13319 367 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 DNAJB7Q7Z6W7 309 aaPredicted RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 CCDC117Q8IWD4 279 aaPredicted RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 MIER2Q8N344 545 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 RNF170Q96K19 258 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 ASB2Q96Q27 587 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 RNF167Q9H6Y7 350 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 NUP50Q9UKX7 468 aa13.62□□□□□ -0.23
LIG1-203ENST00000536218 ZFC3H1O60293 1989 aaKnown RBP13.62□□□□□ -0.23
LIG1-203ENST00000536218 BBIP1A8MTZ0 92 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 LEUTXA8MZ59 168 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 UPK1AO00322 258 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 GLP2RO95838 553 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 S1PR4O95977 384 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 UMPSP11172 480 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 CYP2A6P11509 494 aaPredicted RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 CDH4P55283 916 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SMAD3P84022 425 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 CHRNB3Q05901 458 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 HABP4Q5JVS0 413 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 TXNDC8Q6A555 127 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 PRSS48Q7RTY5 328 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ARL14EPQ8N8R7 260 aaPredicted RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 LPCAT1Q8NF37 534 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 FBXO30Q8TB52 745 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ITFG1Q8TB96 612 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TMEM125Q96AQ2 219 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TM9SF2Q99805 663 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 MAGEH1Q9H213 219 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 BPIFA1Q9NP55 256 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SLAMF8Q9P0V8 285 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ATPIF1Q9UII2 106 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 AP3M1Q9Y2T2 418 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 MROH6A6NGR9 719 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 CD3EAPO15446 510 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 SUPT7LO94864 414 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 C1RP00736 705 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 CXCL10P02778 98 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ACRP10323 421 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 DNAJB1P25685 340 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 OR4D2P58180 307 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SEMA3AQ14563 771 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SMN1Q16637 294 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 BTBD16Q32M84 506 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 GPAT3Q53EU6 434 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 UBE2J2Q8N2K1 259 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 PYCR2Q96C36 320 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 MSANTD3Q96H12 275 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 PDFQ9HBH1 243 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 IGSF5Q9NSI5 407 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SCN3BQ9NY72 215 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TMPRSS11EQ9UL52 423 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 MIA3Q5JRA6 1907 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 HMX3A6NHT5 357 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TARM1B6A8C7 271 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 BCKDKO14874 412 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SLC7A4O43246 635 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 CST1P01037 141 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ATP5F1P24539 256 aaPredicted RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 CSRP3P50461 194 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 CDH13P55290 713 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 RAD51Q06609 339 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 GPR50Q13585 617 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 RAPSNQ13702 412 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 VEPH1Q14D04 833 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 ADGRF1Q5T601 910 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 SULT1C3Q6IMI6 304 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 EID3Q8N140 333 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 OR4K2Q8NGD2 314 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
LIG1-203ENST00000536218 TRNT1Q96Q11 434 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 MRPL57Q9BQC6 102 aaKnown RBP13.61□□□□□ -0.23
LIG1-203ENST00000536218 MN1Q10571 1320 aaPredicted RBP13.6□□□□□ -0.23
LIG1-203ENST00000536218 H3BNC9 293 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 CLDN11O75508 207 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 PDGFAP04085 211 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 SOD2P04179 222 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 LTA4HP09960 611 aaKnown RBP13.6□□□□□ -0.23
LIG1-203ENST00000536218 CD6P30203 668 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 KCNC1P48547 511 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 CLCN5P51795 746 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 GRB7Q14451 532 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 FAM98BQ52LJ0 330 aaKnown RBP13.6□□□□□ -0.23
LIG1-203ENST00000536218 FBXO48Q5FWF7 155 aa13.6□□□□□ -0.23
LIG1-203ENST00000536218 AGAP9Q5VTM2 703 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms