RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 PIP5K1BO14986 540 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ORC5O43913 435 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 MITFO75030 526 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 AOC2O75106 756 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 TNFRSF21O75509 655 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 GDF11O95390 407 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 LTA4HP09960 611 aaKnown RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ACSM4P0C7M7 580 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 RORCP51449 518 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 HERVK_113P63132 956 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 GRIK4Q16099 956 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 LCN1P1Q5VSP4 162 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 JADE1Q6IE81 842 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 MZT2BQ6NZ67 158 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM107Q6UX40 140 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ENTHD1Q8IYW4 607 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ARRDC4Q8NCT1 418 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 LPCAT1Q8NF37 534 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SYTL5Q8TDW5 730 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 LINC00052Q96N35 136 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 NECTIN4Q96NY8 510 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 RBP7Q96R05 134 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ERVK-6Q9BXR3 956 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 GABARAPL3Q9BY60 117 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 BARHL1Q9BZE3 327 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ELOVL4Q9GZR5 314 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 FAM124BQ9H5Z6 455 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 NT5DC2Q9H857 520 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 KCMF1Q9P0J7 381 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SIX4Q9UIU6 781 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 MRPS7Q9Y2R9 242 aaKnown RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 LOC100506127A0A0U1RQW1 187 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 AZIN1O14977 448 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 PCDHGA12O60330 932 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 DPM1O60762 260 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 RPS6KA4O75676 772 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 C9P02748 559 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 HGFP14210 728 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 DARSP14868 501 aaKnown RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SYN1P17600 705 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 CYP2B6P20813 491 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 RAB14P61106 215 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 DGKZQ13574 1117 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 PGM5Q15124 567 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SURF1Q15526 300 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 GPR33Q49SQ1 333 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ARHGAP36Q6ZRI8 547 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ZZZ3Q8IYH5 903 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 EIF4E3Q8N5X7 224 aaKnown RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 TTC29Q8NA56 475 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 C2CD4AQ8NCU7 369 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 RIT1Q92963 219 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 CREB3L1Q96BA8 519 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SGK3Q96BR1 496 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 HRASLS5Q96KN8 279 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 KCTD15Q96SI1 283 aaPredicted RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SLC9A7Q96T83 725 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 CHCHD6Q9BRQ6 235 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 TUBB1Q9H4B7 451 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 ZFR2Q9UPR6 939 aaKnown RBP7.92□□□□□ -1.14
CSDE1-214ENST00000530886 PCDHGB7Q9Y5F8 929 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 SESN1Q9Y6P5 492 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 OR6C65A6NJZ3 312 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 DGAT1O75907 488 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ALDH1A1P00352 501 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 HLA-DOAP06340 250 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 CTPS1P17812 591 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PRKACGP22612 351 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ITGB7P26010 798 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 HSD17B2P37059 387 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RPL34P49207 117 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MEOX2P50222 304 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SH3BP2P78314 561 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PWP1Q13610 501 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RPS6KA2Q15349 733 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TAF12Q16514 161 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 XKR7Q5GH72 579 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 BSPRYQ5W0U4 402 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TEX47Q8TBZ9 253 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 LGMNQ99538 433 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SEC22CQ9BRL7 303 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 CDCA4Q9BXL8 241 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RIBC2Q9H4K1 309 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TMLHEQ9NVH6 421 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SLAMF8Q9P0V8 285 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM5Q9Y2B1 443 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MRPL11Q9Y3B7 192 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TRAV6A0A075B6T7 132 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SLC22A23A1A5C7 686 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PCDH17O14917 1159 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 INPPL1O15357 1258 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 FABP7O15540 132 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 CILPO75339 1184 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 GPX5O75715 221 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RECQL5O94762 991 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 NMBRP28336 390 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SLC19A1P41440 591 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 CCT3P49368 545 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 EPHA4P54764 986 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms