RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 XKR6Q5GH73 641 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 ZC3H12BQ5HYM0 836 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 PAGE2BQ5JRK9 111 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 GALNT18Q6P9A2 607 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 TMEM220Q6QAJ8 160 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 SERPINA13PQ6UXR4 307 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 MBOAT1Q6ZNC8 495 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 HIPK1Q86Z02 1210 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 ZDHHC13Q8IUH4 622 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 CPA6Q8N4T0 437 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 KRTCAP2Q8N6L1 136 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 NAT16Q8N8M0 369 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 OR10A6Q8NH74 314 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 NELL1Q92832 810 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 BADQ92934 168 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 UBE2E3Q969T4 207 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 C11orf24Q96F05 449 aaPredicted RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 SEPHS2Q99611 448 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 EFCAB11Q9BUY7 163 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 RBM38Q9H0Z9 239 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 CAAP1Q9H8G2 361 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 TRPV4Q9HBA0 871 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 ITM2CQ9NQX7 267 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 DDX18Q9NVP1 670 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 THG1LQ9NWX6 298 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 CXXC1Q9P0U4 656 aaPredicted RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 STOX2Q9P2F5 926 aaPredicted RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 DEC1Q9P2X7 70 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 PPT2Q9UMR5 302 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 SAMD4AQ9UPU9 718 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 DLGAP4Q9Y2H0 992 aa10.38□□□□□ -0.75
PUF60-213ENST00000528999 WBP11Q9Y2W2 641 aaKnown RBP10.38□□□□□ -0.75
PUF60-213ENST00000528999 PLXNB3Q9ULL4 1909 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 FAM149AA5PLN7 773 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 G3V2T6 193 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 H3BM21 787 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PDLIM1O00151 329 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 UPK1AO00322 258 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 EI24O14681 340 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 NPC1O15118 1278 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 TSPAN6O43657 245 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 TPST1O60507 370 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PRAMEF4O60810 478 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ALBP02768 609 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ABCB1P08183 1280 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 BMP1P13497 986 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 HSD17B2P37059 387 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 MTHFRP42898 656 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PHC1P78364 1004 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 NTHL1P78549 312 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 HTRA3P83110 453 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ACSM2AQ08AH3 577 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 TOP3AQ13472 1001 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 IL18R1Q13478 541 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 NAE1Q13564 534 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 GTF2H3Q13889 308 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 CAMK1Q14012 370 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 VEZF1Q14119 521 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 GK3PQ14409 553 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ELAVL3Q14576 367 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 HIST2H2ACQ16777 129 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 ZBED5Q49AG3 693 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 CCNYL2Q5T2Q4 361 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 C9orf64Q5T6V5 341 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PRAMEF9Q5VWM5 478 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 CPZQ66K79 652 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ACSM2BQ68CK6 577 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 HIST2H2AA3Q6FI13 130 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 UNC5DQ6UXZ4 953 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 RBM44Q6ZP01 1051 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 PARS2Q7L3T8 475 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 SYT12Q8IV01 421 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 ZCCHC7Q8N3Z6 543 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 FAM47BQ8NA70 645 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PJA1Q8NG27 643 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 OR5K1Q8NHB7 308 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 MAGEE2Q8TD90 523 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 CHTF18Q8WVB6 975 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 SMARCD2Q92925 531 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 FAM162AQ96A26 154 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 COQ8BQ96D53 544 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 NRBF2Q96F24 287 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 APIPQ96GX9 242 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PYURFQ96I23 114 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 VPS50Q96JG6 964 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PKP4Q99569 1192 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 RBM4BQ9BQ04 359 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 TUBA1CQ9BQE3 449 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 RBM4Q9BWF3 364 aaKnown RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 HDAC8Q9BY41 377 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PIDD1Q9HB75 910 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 GDE1Q9NZC3 331 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 IFT80Q9P2H3 777 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 MBD1Q9UIS9 605 aaPredicted RBP10.37□□□□□ -0.75
PUF60-213ENST00000528999 RPS6KA6Q9UK32 745 aa10.37□□□□□ -0.75
PUF60-213ENST00000528999 PCDHGB4Q9UN71 923 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms