RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 RNF19BQ6ZMZ0 732 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SNX20Q7Z614 316 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CPA6Q8N4T0 437 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SCAIQ8N9R8 606 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 GOLM1Q8NBJ4 401 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 NSMCE3Q96MG7 304 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 BRINP2Q9C0B6 783 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SMG9Q9H0W8 520 aaKnown RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 DPEP2Q9H4A9 486 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 CCNB1IP1Q9NPC3 277 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 SCML2Q9UQR0 700 aa10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 GREB1LQ9C091 1923 aaPredicted RBP10.58□□□□□ -0.72
PCDHGA1-202ENST00000517417 MTMR11A4FU01 709 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SCN2BO60939 215 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PDE9AO76083 593 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SCELO95171 688 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 FGF19O95750 216 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 GKP32189 559 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 RYKP34925 604 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TAS2R41P59536 307 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 COX10Q12887 443 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZSWIM7Q19AV6 140 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TPGS2Q68CL5 300 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 AHSA2Q719I0 299 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ISCA2Q86U28 154 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 GALNT13Q8IUC8 556 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PELI3Q8N2H9 469 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 C11orf65Q8NCR3 313 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR5K1Q8NHB7 308 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 EEF1AKMT1Q8WVE0 214 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMEM40Q8WWA1 233 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 Q96MT0 163 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 LHPPQ9H008 270 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 RBM38Q9H0Z9 239 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 FBXW2Q9UKT8 454 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SPATA2Q9UM82 520 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 BTBD3Q9Y2F9 522 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLC22A1O15245 554 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRKD3O94806 890 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 HIST1H2ABP04908 130 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ALDOCP09972 364 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PIM1P11309 404 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 FOXA1P55317 472 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ITGA1P56199 1179 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SRP54P61011 504 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 VITQ6UXI7 678 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 HIST3H2AQ7L7L0 130 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF461Q8TAF7 563 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PIH1D2Q8WWB5 315 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 HIST1H2ACQ93077 130 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 MAELQ96JY0 434 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ZNF347Q96SE7 839 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CTPS2Q9NRF8 586 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TESMINQ9Y4I5 508 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PCDHGA11Q9Y5H2 935 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 GTPBP1O00178 669 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TPST2O60704 377 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 STX11O75558 287 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 S1PR4O95977 384 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SERPINA1P01009 418 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 MYCLP1P12525 358 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ITPKBP27987 946 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ARSDP51689 593 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 GALNT1Q10472 559 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PIK3C3Q8NEB9 887 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 STON2Q8WXE9 905 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 HDAC2Q92769 488 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 AURKBQ96GD4 344 aaPredicted RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 IL12RB2Q99665 862 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 LMAN2LQ9H0V9 348 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PRKAB1Q9Y478 270 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 LOC100130705A0A1B0GUX0 176 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CCDC85CA6NKD9 419 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PPP6CO00743 305 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 S100A1P23297 94 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 AGTR2P50052 363 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 PPIGQ13427 754 aaKnown RBP eCLIP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CARD16Q5EG05 197 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 ANKRD26P1Q6NSI1 321 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TMEM53Q6P2H8 277 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 POMZP3Q6PJE2 187 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 FAM129CQ86XR2 697 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CNTN4Q8IWV2 1026 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 OR2AP1Q8NGE2 309 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 TBC1D15Q8TC07 691 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 LCN9Q8WX39 176 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 SLCO4A1Q96BD0 722 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 L3HYPDHQ96EM0 354 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 RIOK2Q9BVS4 552 aaKnown RBP10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 CD300AQ9UGN4 299 aa10.57□□□□□ -0.72
PCDHGA1-202ENST00000517417 IDH3BO43837 385 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 NR2F6P10588 404 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 G6PDP11413 515 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 DCKP27707 260 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 IL12AP29459 219 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 ERVK-21P61565 698 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 MADCAM1Q13477 382 aa10.56□□□□□ -0.72
PCDHGA1-202ENST00000517417 NPTX1Q15818 432 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms