RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 MRPL19P49406 292 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NEK2P51955 445 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RPL38P63173 70 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RACK1P63244 317 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KCNJ2P63252 427 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HMGCS1Q01581 520 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SIGLEC14Q08ET2 396 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CSTF3Q12996 717 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 STX5Q13190 355 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAD2L1Q13257 205 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CUL3Q13618 768 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 E2F2Q14209 437 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FZD2Q14332 565 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HIST2H2ACQ16777 129 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C10orf62Q5T681 223 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CWF19L1Q69YN2 538 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HIST2H2AA3Q6FI13 130 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MED27Q6P2C8 311 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NXPE4Q6UWF7 544 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAMSTRQ6ZN01 415 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GK5Q6ZS86 529 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 IQCHQ86VS3 1027 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PARGQ86W56 976 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LONP2Q86WA8 852 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C17orf64Q86WR6 236 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZFAND4Q86XD8 727 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ARHGAP24Q8N264 748 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C2orf73Q8N5S3 287 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RBM15BQ8NDT2 890 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR52E1Q8NGJ3 308 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR2L8Q8NGY9 312 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCL4L1Q8NHW4 92 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HMGCLL1Q8TB92 370 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GPBAR1Q8TDU6 330 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 UBE2E3Q969T4 207 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MCUR1Q96AQ8 359 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CXorf40BQ96DE9 158 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 WDR34Q96EX3 536 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HSPA12BQ96MM6 686 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RTKNQ9BST9 563 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MENTQ9BUN1 341 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1orf50Q9BV19 199 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACAT2Q9BWD1 397 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BRINP2Q9C0B6 783 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MIR1-1HGQ9H1L0 117 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1orf21Q9H246 121 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EHD1Q9H4M9 534 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KIR3DX1Q9H7L2 352 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LRTM1Q9HBL6 345 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRM3Q9NNZ6 103 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SDR39U1Q9NRG7 319 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPATA6Q9NWH7 488 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C1orf109Q9NX04 203 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NOP53Q9NZM5 478 aaKnown RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SCHIP1Q9P0W5 487 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TAC3Q9UHF0 121 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PNMA8BQ9ULN7 279 aaPredicted RBP7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SH2B3Q9UQQ2 575 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCL27Q9Y4X3 112 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GPR45Q9Y5Y3 372 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 COL6A3P12111 3177 aa7.38□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GON4LQ3T8J9 2241 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SPAG17Q6Q759 2223 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CACNA1IQ9P0X4 2223 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCDC163A0A0D9SF12 145 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 A0A1W2PR77 199 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PIPSLA2A3N6 862 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 A6NCN8 305 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR5K4A6NMS3 321 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TLR4O00206 839 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AIM2O14862 343 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GSC2O15499 205 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SEC22BO75396 215 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PDGFBP01127 241 aaPredicted RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KRT16P08779 473 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCNAP12004 261 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CDH1P12830 882 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HSD3B1P14060 373 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 JUNDP17535 347 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BCKDHBP21953 392 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRPH2P23942 346 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CXCR2P25025 360 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HSD3B2P26439 372 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAOBP27338 520 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MAPK1P28482 360 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HOXA6P31267 233 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SHMT2P34897 504 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NUDT2P50583 147 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DIO3P55073 304 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NME5P56597 212 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PHEXP78562 749 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ART3Q13508 389 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DDX39BQ13838 428 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLBPQ14493 270 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MMEL1Q495T6 779 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RFTN2Q52LD8 501 aaPredicted RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PDCD4Q53EL6 469 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZNF542PQ5EBM4 170 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms