RNA–Protein interactions for RNA: ENST00000511452.1

NFXL1-208, Transcript of nuclear transcription factor, X-box binding like 1, human

TSL 5

Gene NFXL1, Length 419 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFXL1-208	ENST00000511452	CCDC175	P0C221	793 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	CEBPB	P17676	345 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ERCC2	P18074	760 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	PTAFR	P25105	342 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	CSTF2	P33240	577 aa	Known RBP eCLIP	3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	VAMP7	P51809	220 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF41	P51814	821 aa	Predicted RBP	3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	GSDMD	P57764	484 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	PPARD	Q03181	441 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	TUBB2A	Q13885	445 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	EXT1	Q16394	746 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	GPR33	Q49SQ1	333 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	SLC35D3	Q5M8T2	416 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	C20orf194	Q5TEA3	1177 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	SUSD4	Q5VX71	490 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	CHST3	Q7LGC8	479 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	FAM219A	Q8IW50	185 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	MFN1	Q8IWA4	741 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	MARVELD2	Q8N4S9	558 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF611	Q8N823	705 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF248	Q8NDW4	579 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	OR5AP2	Q8NGF4	316 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	OR13C3	Q8NGS6	347 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	SUSD6	Q92537	303 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	PROX1	Q92786	737 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	EXT2	Q93063	718 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	AZIN2	Q96A70	460 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ASCL2	Q99929	193 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	BAG1	Q99933	345 aa	Predicted RBP	3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	SLC25A23	Q9BV35	468 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	KATNB1	Q9BVA0	655 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	TUBB2B	Q9BVA1	445 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	TRPV4	Q9HBA0	871 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	CHCHD3	Q9NX63	227 aa	Known RBP	3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	RASAL2	Q9UJF2	1139 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	GRID1	Q9ULK0	1009 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	ANGPTL3	Q9Y5C1	460 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	HEG1	Q9ULI3	1381 aa		3.12	□□□□□ -1.91
NFXL1-208	ENST00000511452	NTN3	O00634	580 aa	Predicted RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	CLDN1	O95832	211 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	EEF1B2	P24534	225 aa	Known RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	LEPR	P48357	1165 aa	Known RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	NPY4R	P50391	375 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	BMX	P51813	675 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	LBX1	P52954	281 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	HERV-K104	P61576	105 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	RASGEF1B	Q0VAM2	473 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	HNRNPD	Q14103	355 aa	Known RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF273	Q14593	569 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	TEAD2	Q15562	447 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	OR4A47	Q6IF82	309 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	SLC25A47	Q6Q0C1	308 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452		Q6ZRP5	223 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	CCDC186	Q7Z3E2	898 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	PTAR1	Q7Z6K3	402 aa	Predicted RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	RASGEF1A	Q8N9B8	481 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	OR1L3	Q8NH93	324 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	KIF18A	Q8NI77	898 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF653	Q96CK0	615 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	C4orf45	Q96LM5	186 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	C10orf90	Q96M02	699 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	MAP3K3	Q99759	626 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	PRRG4	Q9BZD6	226 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	GFRA4	Q9GZZ7	299 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZMYND12	Q9H0C1	365 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	ERVMER34-1	Q9H9K5	563 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	KLHL8	Q9P2G9	620 aa	Predicted RBP	3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	POLL	Q9UGP5	575 aa		3.11	□□□□□ -1.91
NFXL1-208	ENST00000511452	TRAV24	A0A0B4J272	114 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	TRBV5-5	A0A0J9YX44	114 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CCDC188	H7C350	402 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	GLRA3	O75311	464 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CDK2AP2	O75956	126 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	SEC24A	O95486	1093 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	APOA4	P06727	396 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	GP1BB	P13224	206 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	LHCGR	P22888	699 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	ALDH1B1	P30837	517 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	SLC6A12	P48065	614 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	ALDH3A2	P51648	485 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	SNRPD1	P62314	119 aa	Known RBP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	DLK1	P80370	383 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	KLC1	Q07866	573 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	NONO	Q15233	471 aa	Known RBP eCLIP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	FCN2	Q15485	313 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CCDC6	Q16204	474 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	PHKG1	Q16816	387 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CTU2	Q2VPK5	515 aa	Known RBP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CCDC184	Q52MB2	194 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	PDLIM3	Q53GG5	364 aa	Predicted RBP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	LACTB2	Q53H82	288 aa	Predicted RBP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	LCE1F	Q5T754	118 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZC2HC1B	Q5TFG8	222 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	TRAT1	Q6PIZ9	186 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	IL27RA	Q6UWB1	636 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	ZNF497	Q6ZNH5	498 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	FAM43B	Q6ZT52	329 aa	Predicted RBP	3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	SLFN11	Q7Z7L1	901 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CNPY4	Q8N129	248 aa		3.1	□□□□□ -1.91
NFXL1-208	ENST00000511452	CCAR2	Q8N163	923 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms