RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 MT-ND1P03886 318 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 OPN1LWP04000 364 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 EPHA3P29320 983 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 HLA-FP30511 346 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GJC1P36383 396 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 POLR2LP62875 67 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SORDQ00796 357 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TUBA3CQ13748 450 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ENPP2Q13822 863 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 E2F2Q14209 437 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ANGPT1Q15389 498 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 FAM98BQ52LJ0 330 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TTC27Q6P3X3 843 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 MAVSQ7Z434 540 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CATSPERDQ86XM0 798 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 UBE2J2Q8N2K1 259 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 FNDC5Q8NAU1 212 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 MCPH1Q8NEM0 835 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 NDNFQ8TB73 568 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 WDR20Q8TBZ3 569 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 WIPF2Q8TF74 440 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 XAGE5Q8WWM1 108 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM125Q96AQ2 219 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 LINGO1Q96FE5 620 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ALG12Q9BV10 488 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 STRADBQ9C0K7 418 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CDCP1Q9H5V8 836 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ATP13A3Q9H7F0 1226 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 NEK6Q9HC98 313 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 VAT1LQ9HCJ6 419 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 IL23AQ9NPF7 189 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PPANQ9NQ55 473 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM248Q9NWD8 314 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PCDHA7Q9UN72 937 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SNX7Q9UNH6 387 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 LOC100509620A0A075B734 347 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TRAV25A0A0B4J276 109 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ATP6V1G1O75348 118 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CEACAM1P13688 526 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 OTX2P32243 289 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PIGHQ14442 188 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ANKRD55Q3KP44 614 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 UGT3A2Q3SY77 523 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TEX44Q53QW1 395 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CARD17Q5XLA6 110 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ANO5Q75V66 913 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GSTA5Q7RTV2 222 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CLEC10AQ8IUN9 316 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SHKBP1Q8TBC3 707 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SAP25Q8TEE9 199 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TSEN15Q8WW01 171 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 IRGQQ8WZA9 623 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TSG101Q99816 390 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM43Q9BTV4 400 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TEX101Q9BY14 249 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CFL2Q9Y281 166 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PCDHAC2Q9Y5I4 1007 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SF3B1O75533 1304 aaKnown RBP eCLIP5.03□□□□□ -1.61e-6■■■■■ 135.1
NIPBL-204ENST00000504430 SDR42E2A6NKP2 422 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GPR171O14626 319 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PLPP2O43688 288 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 BRI3O95415 125 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ITGAMP11215 1152 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 NMBRP28336 390 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 OXTRP30559 389 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SLC6A6P31641 620 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 MMP12P39900 470 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SEC61GP60059 68 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TOP3AQ13472 1001 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PARP6Q2NL67 630 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 ADPRMQ3LIE5 342 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 SYT10Q6XYQ8 523 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 EIF3MQ7L2H7 374 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 KIAA1328Q86T90 577 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 MISPQ8IVT2 679 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 C1orf87Q8N0U7 546 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 GFM2Q969S9 779 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 CTHRC1Q96CG8 243 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 HRASLS5Q96KN8 279 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 TRNT1Q96Q11 434 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 POTEKPQ9BYX7 375 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PCDH9Q9HC56 1237 aa5.03□□□□□ -1.6
NIPBL-204ENST00000504430 PNO1Q9NRX1 252 aaKnown RBP5.03□□□□□ -1.6
NIPBL-204ENST00000504430 INSRP06213 1382 aa5.03□□□□□ -1.61
NIPBL-204ENST00000504430 GOLGA8QA0A0J9YX86 632 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CCDC195A0A1B0GUA6 201 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 A0A1W2PRG0 241 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM191CA6NGB0 347 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TRPC5OSA6NMA1 111 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TTC34A8MYJ7 566 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 LEFTY2O00292 366 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SULT1B1O43704 296 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SSX5O60225 188 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 MBPP02686 304 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM191BP0C7N4 346 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 STAT6P42226 847 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CDC34P49427 236 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CLCN5P51795 746 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF844Q08AG5 666 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 DRP2Q13474 957 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms