RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 SIGLEC10Q96LC7 697 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 C16orf45Q96MC5 204 aaPredicted RBP9.45□□□□□ -0.9
SRSF4-205ENST00000497015 TRAPPC9Q96Q05 1148 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 SLX1AQ9BQ83 275 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 INTS10Q9NVR2 710 aaKnown RBP9.45□□□□□ -0.9
SRSF4-205ENST00000497015 KLHL42Q9P2K6 505 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 G3BP2Q9UN86 482 aaKnown RBP9.45□□□□□ -0.9
SRSF4-205ENST00000497015 DNAJC16Q9Y2G8 782 aa9.45□□□□□ -0.9
SRSF4-205ENST00000497015 PKDREJQ9NTG1 2253 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ZNF469Q96JG9 3925 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 H3BMM5 538 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 PRMT5O14744 637 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 TTI1O43156 1089 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CNOT3O75175 753 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 SEC31AO94979 1220 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 KLK3P07288 261 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 SLC35G4P0C7Q5 338 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 COX6B1P14854 86 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 PGAM1P18669 254 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ARNTP27540 789 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 NMBRP28336 390 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 OTX2P32243 289 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ARCN1P48444 511 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CDKN1CP49918 316 aaPredicted RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 TDGF1P3P51864 188 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CRADDP78560 199 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 HSD11B2P80365 405 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ILF2Q12905 390 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 FRG1Q14331 258 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ANKRD20A4Q4UJ75 823 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CASC4Q6P4E1 433 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 IGFL2Q6UWQ7 119 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 MRGPRGQ86SM5 289 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 MRGPREQ86SM8 312 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 TRIM48Q8IWZ4 208 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ALDH16A1Q8IZ83 802 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 OR1L3Q8NH93 324 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CXorf40BQ96DE9 158 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 MFSD3Q96ES6 412 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 PANX3Q96QZ0 392 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 KRT12Q99456 494 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 EBNA1BP2Q99848 306 aaKnown RBP9.44□□□□□ -0.9
SRSF4-205ENST00000497015 ERP44Q9BS26 406 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 CARD6Q9BX69 1037 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 RAB17Q9H0T7 212 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 FAM96AQ9H5X1 160 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 COG4Q9H9E3 785 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 WHRNQ9P202 907 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 GNPTGQ9UJJ9 305 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 FAM169AQ9Y6X4 670 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 COLEC10Q9Y6Z7 277 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 PCM1Q15154 2024 aa9.44□□□□□ -0.9
SRSF4-205ENST00000497015 MYO7BQ6PIF6 2116 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 ZGRF1Q86YA3 2104 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 ZCWPW2A0A1B0GU75 182 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 OR51F1A6NGY5 319 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 EFCAB8A8MWE9 144 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 EIF3HO15372 352 aaKnown RBP eCLIP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 AVILO75366 819 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 JRKO75564 520 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 VAPBO95292 243 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 NADKO95544 446 aaPredicted RBP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 ESR1P03372 595 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 MTHFD1P11586 935 aaKnown RBP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 TSFMP43897 325 aaKnown RBP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 EMP3P54852 163 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 ARL4CP56559 192 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CAV1Q03135 178 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CALCOCO2Q13137 446 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 SSPNQ14714 243 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 NCF4Q15080 339 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 RPE65Q16518 533 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 LONRF1Q17RB8 773 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 SPANXN3Q5MJ09 141 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 KLHL35Q6PF15 583 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 DET1Q7L5Y6 550 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 GALNT7Q86SF2 657 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CDH24Q86UP0 819 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 KMT5CQ86Y97 462 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CILP2Q8IUL8 1156 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 SYTL1Q8IYJ3 562 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CARFQ8N187 725 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CATSPER1Q8NEC5 780 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 MNS1Q8NEH6 495 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 KIF18AQ8NI77 898 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 DNAJB14Q8TBM8 379 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 FAM167BQ9BTA0 163 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 FAM129AQ9BZQ8 928 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 P2RY12Q9H244 342 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 GSX1Q9H4S2 264 aaPredicted RBP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 CHST11Q9NPF2 352 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 UTP11Q9Y3A2 253 aaKnown RBP9.43□□□□□ -0.9
SRSF4-205ENST00000497015 MRFAP1Q9Y605 127 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 COMMD10Q9Y6G5 202 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 ABCA2Q9BZC7 2435 aa9.43□□□□□ -0.9
SRSF4-205ENST00000497015 SPG11Q96JI7 2443 aa9.42□□□□□ -0.9
SRSF4-205ENST00000497015 E7ESA3 106 aa9.42□□□□□ -0.9
SRSF4-205ENST00000497015 GOLGA8MH3BSY2 632 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms