RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 PRKAA1Q13131 559 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ILKQ13418 452 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 SPIDRQ14159 915 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 PCBP2Q15366 365 aaKnown RBP eCLIP13□□□□□ -0.33
PTPN7-218ENST00000496197 ZIC1Q15915 447 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 UNC50Q53HI1 259 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF678Q5SXM1 525 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 CDCP2Q5VXM1 449 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ICE2Q659A1 982 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 CAPN13Q6MZZ7 669 aaPredicted RBP13□□□□□ -0.33
PTPN7-218ENST00000496197 TMEM71Q6P5X7 295 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 LCTLQ6UWM7 567 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ATG14Q6ZNE5 492 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 MARCH9Q86YJ5 346 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 TCAIMQ8N3R3 496 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 RCBTB1Q8NDN9 531 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 MGARPQ8TDB4 240 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 NEIL2Q969S2 332 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 CCDC74BQ96LY2 380 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 RTKNQ9BST9 563 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ZMYND15Q9H091 742 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 SPNS1Q9H2V7 528 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 EPB41L1Q9H4G0 881 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 OXSMQ9NWU1 459 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 PCTPQ9UKL6 214 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ENTPD2Q9Y5L3 495 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 WDR91A4D1P6 747 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF839A8K0R7 811 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 E7EQ34 232 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 TM9SF1O15321 606 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 HCRTR1O43613 425 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 ZWINTO95229 277 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 TAC1P20366 129 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 MAGP20916 626 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 ARRB2P32121 409 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 PRKAA2P54646 552 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 SF1Q15637 639 aaKnown RBP12.99□□□□□ -0.33
PTPN7-218ENST00000496197 SLC5A12Q1EHB4 618 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 CATSPEREQ5SY80 951 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 THEMIS2Q5TEJ8 643 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 FCRL6Q6DN72 434 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 ARMC6Q6NXE6 501 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 KLHL35Q6PF15 583 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 ZCCHC23Q6ZST2 131 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 GOLGA7Q7Z5G4 137 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 OR4D9Q8NGE8 314 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 RDH11Q8TC12 318 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 C1QTNF3Q9BXJ4 246 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 GSTO2Q9H4Y5 243 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 PDP2Q9P2J9 529 aa12.99□□□□□ -0.33
PTPN7-218ENST00000496197 A0A0J9YY10 115 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 TLCD2A6NGC4 264 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 SLC9B1P1A6NJY1 282 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 K7EPI3 171 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 BPGMP07738 259 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 FGF3P11487 239 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-218ENST00000496197 CDH1P12830 882 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 CD22P20273 847 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 IMPDH1P20839 514 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 CDH3P22223 829 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 GRIA3P42263 894 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 SERPINB4P48594 390 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 SEPHS1P49903 392 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 CDH13P55290 713 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 HERVK_113P63132 956 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 MEF2AQ02078 507 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-218ENST00000496197 PRDX1Q06830 199 aaKnown RBP12.98□□□□□ -0.33
PTPN7-218ENST00000496197 ZFP36L1Q07352 338 aaKnown RBP12.98□□□□□ -0.33
PTPN7-218ENST00000496197 HES3Q5TGS1 186 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 LRRC70Q7Z2Q7 622 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 ARHGAP22Q7Z5H3 698 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 PLXDC1Q8IUK5 500 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 TEX9Q8N6V9 391 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 DCBLD1Q8N8Z6 715 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 ZNF483Q8TF39 744 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-218ENST00000496197 L3HYPDHQ96EM0 354 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 ZDHHC12Q96GR4 267 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 TRAPPC9Q96Q05 1148 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 ERVK-6Q9BXR3 956 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 FAM60AQ9NP50 221 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 DNAJC11Q9NVH1 559 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 SEMA5BQ9P283 1151 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 OPTCQ9UBM4 332 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 WDFY3Q8IZQ1 3526 aa12.98□□□□□ -0.33
PTPN7-218ENST00000496197 PMS2P1A4D2B8 440 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 MATN2O00339 956 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 OR7A17O14581 309 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 HYAL3O43820 417 aaPredicted RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 RASSF9O75901 435 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CTSBP07858 339 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CCND1P24385 295 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 VARSP26640 1264 aaKnown RBP12.97□□□□□ -0.33
PTPN7-218ENST00000496197 SLC18A1P54219 525 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 NAGLUP54802 743 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 PPP2R2AP63151 447 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 E2F1Q01094 437 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 CDC16Q13042 620 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 GTF2H2Q13888 395 aa12.97□□□□□ -0.33
PTPN7-218ENST00000496197 COL9A2Q14055 689 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms