RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 NUP107P57740 925 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 ADARB1P78563 741 aaKnown RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 SMU1Q2TAY7 513 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 OR4F3Q6IEY1 312 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 ABRAXAS1Q6UWZ7 409 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 RNF165Q6ZSG1 346 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CYP2U1Q7Z449 544 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 NECAB2Q7Z6G3 386 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 GPR180Q86V85 440 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 GPR65Q8IYL9 337 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 MRPL43Q8N983 215 aaKnown RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 LZICQ8WZA0 190 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CCDC115Q96NT0 180 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 MUS81Q96NY9 551 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 GORASP2Q9H8Y8 452 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PLGRKTQ9HBL7 147 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 SACM1LQ9NTJ5 587 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 TUBA8Q9NY65 449 aaPredicted RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 WASH3PC4AMC7 463 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 NOBOXO60393 691 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 DEAF1O75398 565 aaPredicted RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 MPC1LP0DKB6 136 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PTPN2P17706 415 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CYP2A7P20853 494 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PRKACGP22612 351 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PTPN6P29350 595 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 SHMT2P34897 504 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 IRS1P35568 1242 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 GRIN2CQ14957 1233 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PON2Q15165 354 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PLEKHS1Q5SXH7 462 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 FRG2Q64ET8 278 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CLEC4FQ8N1N0 589 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CENPSQ8N2Z9 138 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 RASGEF1AQ8N9B8 481 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 L3MBTL4Q8NA19 623 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 OR7A2PQ8NGA2 310 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CDC26Q8NHZ8 85 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 FRG2BQ96QU4 278 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 CPPED1Q9BRF8 314 aaPredicted RBP12.48□□□□□ -0.41
PRAME-213ENST00000492657 SAGE1Q9NXZ1 904 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 ERVK-11Q9UQG0 969 aa12.48□□□□□ -0.41
PRAME-213ENST00000492657 PABPN1LA6NDY0 278 aaKnown RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 TULP3O75386 442 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 SYN1P17600 705 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 AMD1P17707 334 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 EEF1B2P24534 225 aaKnown RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 ELK4P28324 431 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 PBLDP30039 288 aaPredicted RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 HOXD12P35452 270 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 BDKRB1P46663 353 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 GZMMP51124 257 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 DAG1Q14118 895 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 ZNF77Q15935 545 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 CDKL4Q5MAI5 379 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 ANKRD26P1Q6NSI1 321 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 TMEM53Q6P2H8 277 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 BRAT1Q6PJG6 821 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 GRASPQ7Z6J2 395 aaPredicted RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 TMEM179BQ7Z7N9 219 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 SLC7A5P1Q8MH63 180 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 REV3LO60673 3130 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 CREG1O75629 220 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 PRSS23O95084 383 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 CST1P01037 141 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 PDHA2P29803 388 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 IRF8Q02556 426 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 NAE1Q13564 534 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 RAB39AQ14964 217 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 TCEAL5Q5H9L2 206 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 C6orf183Q5T699 404 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 NOXRED1Q6NXP6 359 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 DCDC5Q6ZRR9 648 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 KCTD8Q6ZWB6 473 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 USP51Q70EK9 711 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 PLPP6Q8IY26 295 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 POF1BQ8WVV4 589 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 TANKQ92844 425 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 CMTM7Q96FZ5 175 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 MED8Q96G25 268 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 WRAP53Q9BUR4 548 aaKnown RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 C11orf49Q9H6J7 331 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 CFAP99D6REC4 459 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 E7EQ34 232 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 H3BMQ9 156 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 PER2O15055 1255 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 SERPINA1P01009 418 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 ALBP02768 609 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 ALPLP05186 524 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 CYP2A6P11509 494 aaPredicted RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 XPAP23025 273 aaPredicted RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 HNMTP50135 292 aa12.47□□□□□ -0.41
PRAME-213ENST00000492657 HTRA4P83105 476 aaPredicted RBP12.47□□□□□ -0.41
PRAME-213ENST00000492657 XKR6Q5GH73 641 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms