RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 P4HTMQ9NXG6 502 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 STUB1Q9UNE7 303 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 SHANK2Q9UPX8 1470 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 EPG5Q9HCE0 2579 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 WDR81Q562E7 1941 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 SHANK3Q9BYB0 1731 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 CLASP1Q7Z460 1538 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 RTEL1-TNFRSF6BF6WH68 1400 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 PTPRKQ15262 1439 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 STK36Q9NRP7 1315 aa3.19□□□□□ -1.9
AC055855.1-201ENST00000489563 SPTBN5Q9NRC6 3674 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ASH1LQ9NR48 2969 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 MYO18BQ8IUG5 2567 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 DOPEY1Q5JWR5 2465 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ZNF318Q5VUA4 2279 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 VCANP13611 3396 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 TRAV24A0A0B4J272 114 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 IGHV4-61A0A0C4DH41 118 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 A0A1W2PPK0 400 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 A0A1W2PPW3 197 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ERVV-2B6SEH9 535 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 SNX3O60493 162 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 LUC7L3O95232 432 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 GSRP00390 522 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 IGKV3-20P01619 116 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 IGHV4-59P01825 116 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 GBAP04062 536 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 SP1P08047 785 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 CD48P09326 243 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 PRSS56P0CW18 603 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 IGHV4-31P0DP07 118 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ERVK-10P10266 1014 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 HOXC8P31273 242 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 HOXC13P31276 330 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 MAP2K2P36507 400 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 VAMP7P51809 220 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 TUBB4BP68371 445 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 SQLEQ14534 574 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 NONOQ15233 471 aaKnown RBP eCLIP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 UGCGQ16739 394 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 GTDC1Q4AE62 458 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 LACTB2Q53H82 288 aaPredicted RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 XKR3Q5GH77 459 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 SLC35D3Q5M8T2 416 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 DCLRE1AQ6PJP8 1040 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 USP43Q70EL4 1123 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 BHLHA9Q7RTU4 235 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ABI3BPQ7Z7G0 1075 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 RASGEF1AQ8N9B8 481 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 NOA1Q8NC60 698 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 OR13C3Q8NGS6 347 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 NSMAFQ92636 917 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 GIMAP5Q96F15 307 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 HES6Q96HZ4 224 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ADPGKQ9BRR6 497 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 THUMPD3Q9BV44 507 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 OR2B2Q9GZK3 357 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 CPVLQ9H3G5 476 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 Q9H8V8 135 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ZWILCHQ9H900 591 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 CHST11Q9NPF2 352 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 PPANQ9NQ55 473 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 MRGBPQ9NV56 204 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 CHCHD3Q9NX63 227 aaKnown RBP3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 ZNF112Q9UJU3 913 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 TNNQ9UQP3 1299 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 CHKBQ9Y259 395 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 POMT1Q9Y6A1 747 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 FHOD3Q2V2M9 1422 aa3.18□□□□□ -1.9
AC055855.1-201ENST00000489563 EP400Q96L91 3159 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 LAMA2P24043 3122 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 HTR3EA5X5Y0 456 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 CASTOR2A6NHX0 329 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 EPHB6O15197 1021 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 TRMUO75648 421 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 ATP6AP2O75787 350 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 DFFBO76075 338 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 DDHD2O94830 711 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 CLPTM1O96005 669 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 HMBSP08397 361 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 VIMP08670 466 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 DARSP14868 501 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 GLULP15104 373 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 TCF4P15884 667 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 MTCP1P56278 107 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 GSDMDP57764 484 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 RBP5P82980 135 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 ROR1Q01973 937 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 GCNT1Q02742 428 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 ILF2Q12905 390 aaKnown RBP3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 HERC3Q15034 1050 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 P2RY6Q15077 328 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 HECTD3Q5T447 861 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 LCN1P1Q5VSP4 162 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 OR4A47Q6IF82 309 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 C15orf39Q6ZRI6 1047 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 SPATA19Q7Z5L4 167 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 ANKRD23Q86SG2 305 aa3.17□□□□□ -1.9
AC055855.1-201ENST00000489563 PIGZQ86VD9 579 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms