RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 EIF2B3Q9NR50 452 aaKnown RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 RAB6BQ9NRW1 208 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 MARCH4Q9P2E8 410 aaPredicted RBP8.17□□□□□ -1.1
PRKCB-208ENST00000487674 GNPTGQ9UJJ9 305 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 ANAPC5Q9UJX4 755 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 KLK4Q9Y5K2 254 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 CSAG2Q9Y5P2 127 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 CAPN6Q9Y6Q1 641 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 CACNA1DQ01668 2161 aa8.17□□□□□ -1.1
PRKCB-208ENST00000487674 ABCA12Q86UK0 2595 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 VSTM2BA6NLU5 285 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 E2F3O00716 465 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CD3EAPO15446 510 aaKnown RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PRICKLE3O43900 615 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SRPX2O60687 465 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CTSVO60911 334 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 C1orf105O95561 183 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 ACPPP15309 386 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 RPS3P23396 243 aaKnown RBP eCLIP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 COL8A1P27658 744 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PSMB5P28074 263 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CCNFP41002 786 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 GRIA3P42263 894 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 BDKRB1P46663 353 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CARSP49589 748 aaKnown RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PER3P56645 1201 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 VSX2P58304 361 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 MDC1Q14676 2089 aaKnown RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF169Q14929 603 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 NAA25Q14CX7 972 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 TLR1Q15399 786 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 FAM214AQ32MH5 1076 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PCID2Q5JVF3 399 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PTRHD1Q6GMV3 140 aaKnown RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PRMT9Q6P2P2 845 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SHISA6Q6ZSJ9 500 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 RNF44Q7L0R7 432 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 OTOAQ7RTW8 1153 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 LDB1Q86U70 411 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 TMEM139Q8IV31 216 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 METTL27Q8N6F8 245 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CCDC89Q8N998 374 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 OR2L3Q8NG85 312 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 OR11G2Q8NGC1 345 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SKA2Q8WVK7 121 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 DESI2Q9BSY9 194 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 DIDO1Q9BTC0 2240 aaKnown RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 CRB3Q9BUF7 120 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 P2RY12Q9H244 342 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SOX17Q9H6I2 414 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 TREX1Q9NSU2 369 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SPATA7Q9P0W8 599 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 PAK5Q9P286 719 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 TTC7AQ9ULT0 858 aaPredicted RBP8.16□□□□□ -1.1
PRKCB-208ENST00000487674 ZNF148Q9UQR1 794 aa8.16□□□□□ -1.1
PRKCB-208ENST00000487674 SVILO95425 2214 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 CROCCQ5TZA2 2017 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 A0A0U1RQJ8 604 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 LOC100996750A0A140TA64 210 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 HYKKA2RU49 373 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 ENO4A6NNW6 628 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MAP2K7O14733 419 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 PHF2O75151 1096 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 NDUFS3O75489 264 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 HPP00738 406 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 ERVK-10P10266 1014 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 EDN3P14138 238 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 ATP5DP30049 168 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 OR1D4P47884 311 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 OCA2Q04671 838 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 KLC1Q07866 573 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 CDC16Q13042 620 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MFAP5Q13361 173 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MUM1Q2TAK8 710 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 WASHC2DQ5SRD0 308 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 FRMPD2BQ6IN97 320 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 CNSTQ6PJW8 725 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 FAM180AQ6UWF9 173 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 ISLR2Q6UXK2 745 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 PRUNE1Q86TP1 453 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 KCNMB4Q86W47 210 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 SLC13A5Q86YT5 568 aaPredicted RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 TICAM1Q8IUC6 712 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 RNF10Q8N5U6 811 aaKnown RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 OR2A1Q8NGT9 310 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 DNAJB14Q8TBM8 379 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MAGEC3Q8TD91 643 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 GRHL3Q8TE85 626 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 FAR1Q8WVX9 515 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 C1orf54Q8WWF1 131 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MIEF2Q96C03 454 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 THOC3Q96J01 351 aaKnown RBP8.15□□□□□ -1.1
PRKCB-208ENST00000487674 CNDP1Q96KN2 507 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 FOPNLQ96NB1 174 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 MIPEPQ99797 713 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 SLX1AQ9BQ83 275 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 KRTAP4-6Q9BYQ5 205 aa8.15□□□□□ -1.1
PRKCB-208ENST00000487674 IL22Q9GZX6 179 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms