RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 RBM4Q9BWF3 364 aaKnown RBP17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 POLR1BQ9H9Y6 1135 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 CXorf21Q9HAI6 301 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 SMURF2Q9HAU4 748 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 IL23AQ9NPF7 189 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 EBF1Q9UH73 591 aa17.45■□□□□ 0.38
PDLIM7-207ENST00000486828 DOCK6Q96HP0 2047 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 TMEM202A6NGA9 273 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 HIDE1A8MVS5 230 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 ARHGEF33A8MVX0 844 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 PRMT3O60678 531 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 RFPL2O75678 378 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 CTSLP07711 333 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 RHOP08100 348 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 MYCLP1P12525 358 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 ELK4P28324 431 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 NNMTP40261 264 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 YAP1P46937 504 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 TRPC1P48995 793 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 RAB39AQ14964 217 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF284Q2VY69 593 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 KCTD8Q6ZWB6 473 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 THAP5Q7Z6K1 395 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 THOC6Q86W42 341 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 SYT12Q8IV01 421 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 SLC22A15Q8IZD6 547 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 C8orf59Q8N0T1 100 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 EID3Q8N140 333 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 RNF175Q8N4F7 328 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 WDR20Q8TBZ3 569 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 BTN2A2Q8WVV5 523 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 SORCS1Q8WY21 1168 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 GFM2Q969S9 779 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 PYURFQ96I23 114 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 MBOAT4Q96T53 435 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 ING2Q9H160 280 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 FAM118AQ9NWS6 357 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 THG1LQ9NWX6 298 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 MARK1Q9P0L2 795 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 ATXN10Q9UBB4 475 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 IL36AQ9UHA7 158 aa17.44■□□□□ 0.38
PDLIM7-207ENST00000486828 CDK4P11802 303 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 CTBSQ01459 385 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SRSF11Q05519 484 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 FPGSQ05932 587 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ABRQ12979 859 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 PPIGQ13427 754 aaKnown RBP eCLIP17.43■□□□□ 0.387e-7■■■□□ 17.5
PDLIM7-207ENST00000486828 DUOXA1Q1HG43 343 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SYTL3Q4VX76 610 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 XKR6Q5GH73 641 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 LDLRAP1Q5SW96 308 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF773Q6PK81 442 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 DOK6Q6PKX4 331 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SPESP1Q6UW49 350 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 DPPA4Q7L190 304 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 TECPR1Q7Z6L1 1165 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SERPINA11Q86U17 422 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 KLHDC8AQ8IYD2 350 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 HS3ST5Q8IZT8 346 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF555Q8NEP9 628 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF420Q8TAQ5 688 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ATL1Q8WXF7 558 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 GLMNQ92990 594 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 C12orf43Q96C57 262 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 VPS35Q96QK1 796 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 EBPLQ9BY08 206 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 VPS29Q9UBQ0 182 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 FAM8A1Q9UBU6 413 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 TSPAN6O43657 245 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 CPNE6O95741 557 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 XPAP23025 273 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 DCTP40126 519 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 VAC14Q08AM6 782 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SLC14A1Q13336 389 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 UGT8Q16880 541 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF805Q5CZA5 627 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 RBM48Q5RL73 367 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 CES5AQ6NT32 575 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 ZNF551Q7Z340 670 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 RASGEF1AQ8N9B8 481 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 TMEM159Q96B96 161 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 CCDC138Q96M89 665 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 DOK1Q99704 481 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 TUBA1CQ9BQE3 449 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 REXO4Q9GZR2 422 aaKnown RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 OCEL1Q9H607 264 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 SPATA6Q9NWH7 488 aaPredicted RBP17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 CDC14AQ9UNH5 594 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 WNT6Q9Y6F9 365 aa17.43■□□□□ 0.38
PDLIM7-207ENST00000486828 EVPLLA8MZ36 301 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 E7EQ34 232 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 NOBOXO60393 691 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 CCNDBP1O95273 360 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 DCKP27707 260 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 CTSCP53634 463 aa17.42■□□□□ 0.38
PDLIM7-207ENST00000486828 NUP107P57740 925 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms