RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 NPPBP16860 134 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 TAC1P20366 129 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 MAGP20916 626 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CDH3P22223 829 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CCND1P24385 295 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 ATP5F1P24539 256 aaPredicted RBP13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 ETV4P43268 484 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 INHBCP55103 352 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 PCLAFQ15004 111 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 SF1Q15637 639 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 ZIC1Q15915 447 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 PHF19Q5T6S3 580 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CACHD1Q5VU97 1274 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 LCTLQ6UWM7 567 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 LRRC70Q7Z2Q7 622 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 ARHGAP22Q7Z5H3 698 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 GOLGA6L1Q8N7Z2 621 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 DCBLD1Q8N8Z6 715 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CCDC63Q8NA47 563 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 RDH11Q8TC12 318 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 TRAPPC9Q96Q05 1148 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 TMEM237Q96Q45 408 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CD244Q9BZW8 370 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 ACBD3Q9H3P7 528 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 SEMA5BQ9P283 1151 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 SLC22A14Q9Y267 594 aa13.05□□□□□ -0.32
NUDCD3-207ENST00000478769 TMEM120BA0PK00 339 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 SLC9B1P1A6NJY1 282 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 TOX3O15405 576 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CCNT2O60583 730 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 RPS17P08708 135 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CDH1P12830 882 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CPA3P15088 417 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 EPORP19235 508 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 EEF1DP29692 281 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CMPK1P30085 196 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CCKBRP32239 447 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 GRIA3P42263 894 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 SEPHS1P49903 392 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 PRDX1Q06830 199 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 C16orf72Q14CZ0 275 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 PCBP2Q15366 365 aaKnown RBP eCLIP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 PDK4Q16654 411 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 ISXQ2M1V0 245 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 RPS27LQ71UM5 84 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 RAB44Q7Z6P3 723 aaPredicted RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CARFQ8N187 725 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 C19orf47Q8N9M1 422 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 NEIL2Q969S2 332 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 TMEM74Q96NL1 305 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 DEPDC7Q96QD5 511 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 PCBD2Q9H0N5 130 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 ZNF768Q9H5H4 540 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 MRPS30Q9NP92 439 aaKnown RBP13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 ACSS2Q9NR19 701 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 C1GALT1Q9NS00 363 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 DNAJC11Q9NVH1 559 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 OPTCQ9UBM4 332 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 PCTPQ9UKL6 214 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 CLCA2Q9UQC9 943 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 KLK4Q9Y5K2 254 aa13.04□□□□□ -0.32
NUDCD3-207ENST00000478769 FAM149AA5PLN7 773 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 E7EQ34 232 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 K7EPI3 171 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 AGRPO00253 132 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 E2F3O00716 465 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 TM9SF1O15321 606 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 CCNDBP1O95273 360 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 FKBP9O95302 570 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 ID4P47928 161 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 PRKAA2P54646 552 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 HERVK_113P63132 956 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 ABATP80404 500 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 CDC16Q13042 620 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 FCRL6Q6DN72 434 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 GOLGA7Q7Z5G4 137 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 C17orf64Q86WR6 236 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 C10orf107Q8IVU9 208 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 CHCHD4Q8N4Q1 142 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 ANKRD42Q8N9B4 389 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 SNX31Q8N9S9 440 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 ZNF483Q8TF39 744 aaPredicted RBP13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 SLC5A11Q8WWX8 675 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 KLHL6Q8WZ60 621 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 MOCOSQ96EN8 888 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 SLC41A2Q96JW4 573 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 NSUN5Q96P11 429 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 HAUS8Q9BT25 410 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 DPH7Q9BTV6 452 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 MECRQ9BV79 373 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 C1QTNF3Q9BXJ4 246 aa13.03□□□□□ -0.32
NUDCD3-207ENST00000478769 ERVK-6Q9BXR3 956 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms