RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PIGBQ92521 554 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 MOB3AQ96BX8 217 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 ARSGQ96EG1 525 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 NECTIN4Q96NY8 510 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 NKX3-1Q99801 234 aaPredicted RBP5.48□□□□□ -1.53
SMC5-203ENST00000475540 MAN2C1Q9NTJ4 1040 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 MAN1B1Q9UKM7 699 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 ANGPTL3Q9Y5C1 460 aa5.48□□□□□ -1.53
SMC5-203ENST00000475540 C15orf61A6NNL5 157 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 KPNA7A9QM74 516 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 TRIM77I1YAP6 450 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 VTNP04004 478 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 SLC2A2P11168 524 aaPredicted RBP5.47□□□□□ -1.53
SMC5-203ENST00000475540 PTGER4P35408 488 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 ASCL1P50553 236 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 HUNKP57058 714 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 ITGA7Q13683 1181 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 C9orf152Q5JTZ5 239 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 UGT3A1Q6NUS8 523 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 BTN2A1Q7KYR7 527 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 DET1Q7L5Y6 550 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 MMD2Q8IY49 270 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 OR1L3Q8NH93 324 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 SLCO2A1Q92959 643 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 SECISBP2LQ93073 1101 aaKnown RBP5.47□□□□□ -1.53
SMC5-203ENST00000475540 NKIRAS2Q9NYR9 191 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 RNF150Q9ULK6 438 aa5.47□□□□□ -1.53
SMC5-203ENST00000475540 A0A1W2PPM1 405 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 PLOD3O60568 738 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 SEC24AO95486 1093 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 C22orf31O95567 290 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 MMP12P39900 470 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 CAPZA2P47755 286 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 CUL3Q13618 768 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 NECTIN1Q15223 517 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 VWC2Q2TAL6 325 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 TCTE1Q5JU00 501 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 DOK6Q6PKX4 331 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 ZBTB49Q6ZSB9 765 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 IQCHQ86VS3 1027 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 OR6S1Q8NH40 331 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 MAPK15Q8TD08 544 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 FEVQ99581 238 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 PRRG4Q9BZD6 226 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 ZMYND12Q9H0C1 365 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 THAP2Q9H0W7 228 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 UPF3AQ9H1J1 476 aaKnown RBP5.46□□□□□ -1.54
SMC5-203ENST00000475540 TLE6Q9H808 572 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 NOTCH3Q9UM47 2321 aa5.46□□□□□ -1.54
SMC5-203ENST00000475540 SAGP10523 405 aaPredicted RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 LHCGRP22888 699 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 OPRL1P41146 370 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 HNF4AP41235 474 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 LHX1P48742 406 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 CSE1LP55060 971 aaKnown RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 CALD1Q05682 793 aaKnown RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 PRPF4BQ13523 1007 aaKnown RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 CCDC184Q52MB2 194 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 NAA16Q6N069 864 aaPredicted RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 IL27RAQ6UWB1 636 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 CENPTQ96BT3 561 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 FAM71F1Q96KD3 344 aaPredicted RBP5.45□□□□□ -1.54
SMC5-203ENST00000475540 ANKEF1Q9NU02 776 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 WDR83OSQ9Y284 106 aa5.45□□□□□ -1.54
SMC5-203ENST00000475540 TRBC2A0A5B9 178 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 PTGESO14684 152 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 RPN1P04843 607 aaKnown RBP5.44□□□□□ -1.54
SMC5-203ENST00000475540 PRKAR1AP10644 381 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 AKR1B1P15121 316 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 CYP2A7P20853 494 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 EEF1B2P24534 225 aaKnown RBP5.44□□□□□ -1.54
SMC5-203ENST00000475540 KRT20P35900 424 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 LBX1P52954 281 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 RALGDSQ12967 914 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 SPECC1Q5M775 1068 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 MFSD4BQ5TF39 518 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 CENPVQ7Z7K6 275 aaPredicted RBP5.44□□□□□ -1.54
SMC5-203ENST00000475540 LSMEM1Q8N8F7 131 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 SLC4A11Q8NBS3 891 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 ZNF519Q8TB69 540 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 APOBEC4Q8WW27 367 aaKnown RBP5.44□□□□□ -1.54
SMC5-203ENST00000475540 NSMCE3Q96MG7 304 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 PYGO2Q9BRQ0 406 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 WWTR1Q9GZV5 400 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 CDH20Q9HBT6 801 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 SPHK2Q9NRA0 654 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 PANK4Q9NVE7 773 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 CHKBQ9Y259 395 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 R4GN57 208 aa5.44□□□□□ -1.54
SMC5-203ENST00000475540 O00370 1275 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 PSMD10O75832 226 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 UGT1A4P22310 534 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 POLR2LP62875 67 aaKnown RBP5.43□□□□□ -1.54
SMC5-203ENST00000475540 CYCSP99999 105 aaKnown RBP5.43□□□□□ -1.54
SMC5-203ENST00000475540 MYL7Q01449 175 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 CRY2Q49AN0 593 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 ARMC4Q5T2S8 1044 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 Q6ZRP5 223 aa5.43□□□□□ -1.54
SMC5-203ENST00000475540 LYG1Q8N1E2 194 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms