RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TEDDM1Q5T9Z0 273 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 TCTN3Q6NUS6 607 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 TTLL10Q6ZVT0 673 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 UBE2R2Q712K3 238 aaPredicted RBP21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 RNF44Q7L0R7 432 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 RAB43Q86YS6 212 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 TTC29Q8NA56 475 aaPredicted RBP21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 ZNF480Q8WV37 535 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 DPH7Q9BTV6 452 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 SLC6A20Q9NP91 592 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 MRPS30Q9NP92 439 aaKnown RBP21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 ANKMY1Q9P2S6 941 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 SLC17A6Q9P2U8 582 aa21.6■■□□□ 1.05
PTP4A1-203ENST00000473334 FITM1A5D6W6 292 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 DSCR3O14972 297 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 TP73O15350 636 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 NRP2O60462 931 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 CCNDBP1O95273 360 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 ATXN8OSP0DMR3 200 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 RPL21P46778 160 aaKnown RBP21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 VSX2P58304 361 aaPredicted RBP21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 YBX1P67809 324 aaKnown RBP21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 CHAF1BQ13112 559 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 SLC9A5Q14940 896 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 TRMT10BQ6PF06 316 aaKnown RBP21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 PPFIBP2Q8ND30 876 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 ING2Q9H160 280 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 ACSS2Q9NR19 701 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 CUTCQ9NTM9 273 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 CCDC88CQ9P219 2028 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 TAC3Q9UHF0 121 aa21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 CORO1CQ9ULV4 474 aaPredicted RBP21.59■■□□□ 1.05
PTP4A1-203ENST00000473334 A0A0J9YVX5 310 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 E7ENX8 843 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 CASQ1P31415 396 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 FOLR3P41439 243 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 CDKN2DP55273 166 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 TAP2Q03519 686 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 PRDX1Q06830 199 aaKnown RBP21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 FRG1Q14331 258 aaKnown RBP21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 ICE2Q659A1 982 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 FRMPD2BQ6IN97 320 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 MRPL14Q6P1L8 145 aaKnown RBP21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 ANKMY2Q8IV38 441 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 C17orf53Q8N3J3 647 aaPredicted RBP21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 BBOF1Q8ND07 529 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 EEF1AKMT1Q8WVE0 214 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 ZFYVE21Q9BQ24 234 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 PLCD4Q9BRC7 762 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 ANAPC2Q9UJX6 822 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 SNX24Q9Y343 169 aa21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 PTRH2Q9Y3E5 179 aaKnown RBP21.58■■□□□ 1.05
PTP4A1-203ENST00000473334 HEATR5BQ9P2D3 2071 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 FAM187AA6NFU0 413 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 E7ESA3 106 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 PIM1P11309 404 aaPredicted RBP21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 NR1D1P20393 614 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 ITGAXP20702 1163 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 IMPA1P29218 277 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 OTX2P32243 289 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 ETF1P62495 437 aaKnown RBP21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 PDIA2Q13087 525 aaKnown RBP21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 SP140Q13342 867 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 SSPNQ14714 243 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 FAM214AQ32MH5 1076 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 WASHC2DQ5SRD0 308 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 PAQR3Q6TCH7 311 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 MYO1HQ8N1T3 1032 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 FBXO36Q8NEA4 188 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 SPATA4Q8NEY3 305 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 OR2Y1Q8NGV0 311 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 FKBP10Q96AY3 582 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 IP6K3Q96PC2 410 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 SLC22A11Q9NSA0 550 aa21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 UTP6Q9NYH9 597 aaKnown RBP21.57■■□□□ 1.04
PTP4A1-203ENST00000473334 MED13Q9UHV7 2174 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 IGKV1-8A0A0C4DH67 115 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 K7EM74 188 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 CNOT3O75175 753 aaKnown RBP21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ONECUT2O95948 504 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 C8GP07360 202 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 CCL11P51671 97 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ABATP80404 500 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ATP1A4Q13733 1029 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 FASTKD3Q14CZ7 662 aaKnown RBP21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 FBXO42Q6P3S6 717 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ASB18Q6ZVZ8 466 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 MED25Q71SY5 747 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 MAATS1Q7Z4T9 603 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 PAQR7Q86WK9 346 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 PALM2Q8IXS6 379 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 LRRC56Q8IYG6 542 aaPredicted RBP21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 GPATCH11Q8N954 259 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 TMEM102Q8N9M5 508 aaPredicted RBP21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 MCOLN3Q8TDD5 553 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 LINGO1Q96FE5 620 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 TRIM4Q9C037 500 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ABCF3Q9NUQ8 709 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ZFATQ9P243 1243 aa21.56■■□□□ 1.04
PTP4A1-203ENST00000473334 ADAMTS6Q9UKP5 1117 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms