RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TMEM102Q8N9M5 508 aaPredicted RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 MRPS26Q9BYN8 205 aaKnown RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 ATG10Q9H0Y0 220 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 ZNF696Q9H7X3 374 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 SPAG4Q9NPE6 437 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 SCHIP1Q9P0W5 487 aaPredicted RBP18.05■□□□□ 0.48
CAPN3-209ENST00000466222 TBC1D29Q9UFV1 150 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PCTPQ9UKL6 214 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PADI4Q9UM07 663 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 PLAGL1Q9UM63 463 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 TRAF6Q9Y4K3 522 aa18.05■□□□□ 0.48
CAPN3-209ENST00000466222 OR52A4PA6NMU1 304 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 RPS17P08708 135 aaKnown RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 RPL5P46777 297 aaKnown RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 SH3BP2P78314 561 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 RAB44Q7Z6P3 723 aaPredicted RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 PDZD3Q86UT5 571 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 RGL4Q8IZJ4 473 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 LILRA2Q8N149 483 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 C1orf216Q8TAB5 229 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 MCOLN3Q8TDD5 553 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 TFGQ92734 400 aaPredicted RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 ROPN1LQ96C74 230 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 KLHDC7BQ96G42 594 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 PKP4Q99569 1192 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 PKP2Q99959 881 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 TIMM29Q9BSF4 260 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 TM9SF3Q9HD45 589 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 GPR27Q9NS67 375 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 WWOXQ9NZC7 414 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 ASF1AQ9Y294 204 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 FIS1Q9Y3D6 152 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 A0A1W2PR77 199 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 STX16-NPEPL1H3BU86 382 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 STX16O14662 325 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 STAMBPO95630 424 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 HIST1H2AGP0C0S8 130 aaPredicted RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 SMIM18P0DKX4 95 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 HIST1H2ADP20671 130 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 CYP2A7P20853 494 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 ITPKAP23677 461 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 CD38P28907 300 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 STX1BP61266 288 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 RHDQ02161 417 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 DMPKQ09013 629 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 ADRM1Q16186 407 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 AGKQ53H12 422 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 SAMD4BQ5PRF9 694 aaKnown RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 NRROSQ86YC3 692 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 SFTPA2Q8IWL1 248 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 HIST1H2AHQ96KK5 128 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 CDK15Q96Q40 435 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 INSM2Q96T92 566 aaPredicted RBP18.04■□□□□ 0.48
CAPN3-209ENST00000466222 HIST1H2AJQ99878 128 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 H2AFJQ9BTM1 129 aa18.04■□□□□ 0.48
CAPN3-209ENST00000466222 SLC16A5O15375 505 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 SLC16A8O95907 504 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 S100BP04271 92 aaPredicted RBP18.03■□□□□ 0.48
CAPN3-209ENST00000466222 ANXA5P08758 320 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 MAP4P27816 1152 aaKnown RBP18.03■□□□□ 0.48
CAPN3-209ENST00000466222 HOXA6P31267 233 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 CSNK1EP49674 416 aaKnown RBP18.03■□□□□ 0.48
CAPN3-209ENST00000466222 NAA20P61599 178 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 CLCQ05315 142 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 RPA4Q13156 261 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 SP140Q13342 867 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 ANKS6Q68DC2 871 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 SLC36A4Q6YBV0 504 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 LARP4Q71RC2 724 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN3-209ENST00000466222 CLYBLQ8N0X4 340 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 OR52B6Q8NGF0 335 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 HMGCLL1Q8TB92 370 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 FOPNLQ96NB1 174 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 KCNA7Q96RP8 456 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 EFHD1Q9BUP0 239 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 ZNF225Q9UK10 706 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 CROTQ9UKG9 612 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 AP4S1Q9Y587 144 aa18.03■□□□□ 0.48
CAPN3-209ENST00000466222 NCOR1O75376 2440 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 GON4LQ3T8J9 2241 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 TRBV23OR9-2A0A075B6M9 112 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 PDZK1P1A8MUH7 402 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 E7ENX8 843 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 TNFRSF10CO14798 259 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 MRASO14807 208 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 NRP2O60462 931 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 CATP04040 527 aaKnown RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 ENO2P09104 434 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 FOXA1P55317 472 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 PLOD1Q02809 727 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 C1orf61Q13536 156 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 CLEC6AQ6EIG7 209 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 SULT1C3Q6IMI6 304 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 C8orf82Q6P1X6 216 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 C2orf73Q8N5S3 287 aaPredicted RBP18.02■□□□□ 0.48
CAPN3-209ENST00000466222 PCYOX1LQ8NBM8 494 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 IL17FQ96PD4 163 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 HGH1Q9BTY7 390 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 TRIM54Q9BYV2 358 aa18.02■□□□□ 0.48
CAPN3-209ENST00000466222 CD244Q9BZW8 370 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms