RNA–Protein interactions for RNA: ENST00000453954.6

TCF3-204, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 3,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-204ENST00000453954 ZSCAN5BA6NJL1 495 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 PCMT1P22061 227 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CSRP3P50461 194 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 NPRL3Q12980 569 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CCL14Q16627 93 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 PRRT2Q7Z6L0 340 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 HMGN2P46Q86SG4 172 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 LILRB4Q8NHJ6 448 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CLIP3Q96DZ5 547 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 EMILIN2Q9BXX0 1053 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 HOXD1Q9GZZ0 328 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CTPS2Q9NRF8 586 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 DCAF13Q9NV06 445 aaKnown RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 ZFP37Q9Y6Q3 630 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 BRWD3Q6RI45 1802 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 MIA3Q5JRA6 1907 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 CSTF3Q12996 717 aaKnown RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 NFE2L1Q14494 772 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 MAD2L1BPQ15013 274 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 CTXN3Q4LDR2 81 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 ZMAT1Q5H9K5 638 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 ATAD3CQ5T2N8 411 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 ZNF517Q6ZMY9 492 aaPredicted RBP16.82■□□□□ 0.28
TCF3-204ENST00000453954 AGMOQ6ZNB7 445 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 KBTBD8Q8NFY9 601 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 OR5AK3PQ8NH89 298 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 SPASTQ9UBP0 616 aa16.82■□□□□ 0.28
TCF3-204ENST00000453954 SMIM35A0A1B0GVV1 85 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 TNFRSF11BO00300 401 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 WWP2O00308 870 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PRAMEF1O95521 474 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ATXN8OSP0DMR3 200 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 KIR3DL1P43629 444 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RPL34P49207 117 aaKnown RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 ZNF135P52742 658 aaPredicted RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 RHOAP61586 193 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 DGKKQ5KSL6 1271 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ERAP2Q6P179 960 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 SERPINA9Q86WD7 417 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 STK40Q8N2I9 435 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 GOLM1Q8NBJ4 401 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 YME1L1Q96TA2 773 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 TRIM62Q9BVG3 475 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 QPCTLQ9NXS2 382 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 TAS2R9Q9NYW1 312 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 SAP18O00422 153 aaKnown RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 AP2A2O94973 939 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 CA5AP35218 305 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 BMPR1AP36894 532 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 CRYBB1P53674 252 aaPredicted RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 SLC35A2P78381 396 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 IFITM2Q01629 132 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ELP6Q0PNE2 266 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 GPR142Q7Z601 462 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RAB43Q86YS6 212 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PAPD5Q8NDF8 572 aaKnown RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 NPLOC4Q8TAT6 608 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 NELL1Q92832 810 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PGAP3Q96FM1 320 aaPredicted RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 ZNF382Q96SR6 550 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RTP3Q9BQQ7 232 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 SAMD4AQ9UPU9 718 aaKnown RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 TMEM88BA6NKF7 163 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 OR7A17O14581 309 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PTHP01270 115 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 GRK5P34947 590 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ZNF177Q13360 481 aaPredicted RBP16.81■□□□□ 0.28
TCF3-204ENST00000453954 IL18R1Q13478 541 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ACOX1Q15067 660 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PYDC2Q56P42 97 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RAB41Q5JT25 222 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PDZK1Q5T2W1 519 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ADAMTSL2Q86TH1 951 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 SH3KBP1Q96B97 665 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 PHF21AQ96BD5 680 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 RHBDF1Q96CC6 855 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 TCF25Q9BQ70 676 aa16.81■□□□□ 0.28
TCF3-204ENST00000453954 ANK1P16157 1881 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 TRIP12Q14669 1992 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 PRAMEF12O95522 483 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 SOX3P41225 446 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 GABARAPL2P60520 117 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 NDUFA5Q16718 116 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 RNF219Q5W0B1 726 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 LSRQ86X29 649 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 LMNTD1Q8N9Z9 388 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 OR9Q2Q8NGE9 314 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 ZNF300Q96RE9 604 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 BRINP2Q9C0B6 783 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 FAM124BQ9H5Z6 455 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 MS4A12Q9NXJ0 267 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 CLCA3PQ9Y6N3 262 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 SMLR1H3BR10 107 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 HPRP00739 348 aa16.8■□□□□ 0.28
TCF3-204ENST00000453954 HIST1H2AGP0C0S8 130 aaPredicted RBP16.8■□□□□ 0.28
TCF3-204ENST00000453954 HIST1H2ADP20671 130 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms