RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 PLA2G4FQ68DD2 849 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 METTL2BQ6P1Q9 378 aaKnown RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 CASC1Q6TDU7 716 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 B3GNT6Q6ZMB0 384 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 GBP6Q6ZN66 633 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 MSANTD1Q6ZTZ1 278 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 DSG4Q86SJ6 1040 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KLHL7Q8IXQ5 586 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 RASGEF1CQ8N431 466 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 NCOA7Q8NI08 942 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PPTC7Q8NI37 304 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 EXOC6Q8TAG9 804 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 HMGCLL1Q8TB92 370 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 SEPT1Q8WYJ6 367 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 APBB2Q92870 758 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 OTULINQ96BN8 352 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TBC1D31Q96DN5 1066 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 METTL2AQ96IZ6 378 aaKnown RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 SPATA33Q96N06 139 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 WACQ9BTA9 647 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 KATNB1Q9BVA0 655 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 THSD1Q9NS62 852 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PRMT7Q9NVM4 692 aaPredicted RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 SEPT10Q9P0V9 454 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 PCDHA12Q9UN75 941 aa4.21□□□□□ -1.74
LINC00393-202ENST00000452852 BAZ2BQ9UIF8 2168 aaKnown RBP4.21□□□□□ -1.74
LINC00393-202ENST00000452852 TMEM272A0A1B0GTI8 110 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 HTR3EA5X5Y0 456 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CD8B2A6NJW9 211 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 EIF4E1BA6NMX2 242 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 B4DGG1 531 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FAM86B1E9PN63 330 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 DDX39AO00148 427 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MAP2K7O14733 419 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 KCNAB3O43448 404 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ATG13O75143 517 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 STAM2O75886 525 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 NDUFB8O95169 186 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 EPN2O95208 641 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 IGHDP01880 384 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FAM86B2P0C5J1 330 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FAM58BPP0C7Q3 252 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MYZAPP0CAP1 466 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CHRNB2P17787 502 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CYP11B2P19099 503 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 HLA-DPA1P20036 260 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 TCEA1P23193 301 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MYF6P23409 242 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 NR2F2P24468 414 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CALRP27797 417 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 KIF5BP33176 963 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 KCNJ1P48048 391 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 YBEYP58557 167 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 INPP5JQ15735 1006 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ANKRD20A4Q4UJ75 823 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ANKRD20A8PQ5CZ79 823 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 DNAJC21Q5F1R6 531 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 GLRA4Q5JXX5 417 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ANKRD20A2Q5SQ80 823 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CELF3Q5SZQ8 465 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ANKRD20A1Q5TYW2 823 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ANKRD20A3Q5VUR7 823 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 RAB12Q6IQ22 244 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 LINC00696Q6ZRV3 163 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 STOX1Q6ZVD7 989 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CACNA2D4Q7Z3S7 1137 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 SPATA21Q7Z572 469 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 TMEM173Q86WV6 379 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 CAMK1DQ8IU85 385 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FAM219AQ8IW50 185 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 TEX45Q8NA69 505 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 WDR20Q8TBZ3 569 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 PIBF1Q8WXW3 757 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 RND1Q92730 232 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ATP6V0A1Q93050 837 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 SLC25A28Q96A46 364 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 ARSGQ96EG1 525 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 AK8Q96MA6 479 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 NLRP4Q96MN2 994 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 NEK1Q96PY6 1258 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 WDR77Q9BQA1 342 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 WDR83Q9BRX9 315 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FAM234AQ9H0X4 552 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 FZD8Q9H461 694 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 EBF3Q9H4W6 596 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 KLHL31Q9H511 634 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MAGIXQ9H6Y5 334 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MAP6D1Q9H9H5 199 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MMP25Q9NPA2 562 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 EQTNQ9NQ60 294 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 AKAP7Q9P0M2 348 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 STK39Q9UEW8 545 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MAD2L2Q9UI95 211 aa4.2□□□□□ -1.74
LINC00393-202ENST00000452852 TTC7AQ9ULT0 858 aaPredicted RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 MYH9P35579 1960 aaKnown RBP4.2□□□□□ -1.74
LINC00393-202ENST00000452852 A0A1W2PRV1 198 aa4.19□□□□□ -1.74
LINC00393-202ENST00000452852 CCDC69A6NI79 296 aa4.19□□□□□ -1.74
LINC00393-202ENST00000452852 RSPH10B2B2RC85 870 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms