RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 YIPF2Q9BWQ6 316 aa13.28□□□□□ -0.28
SEC13-211ENST00000431352 IL22Q9GZX6 179 aa13.28□□□□□ -0.28
SEC13-211ENST00000431352 ZNF304Q9HCX3 659 aa13.28□□□□□ -0.28
SEC13-211ENST00000431352 SYBUQ9NX95 663 aa13.28□□□□□ -0.28
SEC13-211ENST00000431352 OSGIN2Q9Y236 505 aa13.28□□□□□ -0.28
SEC13-211ENST00000431352 MDC1Q14676 2089 aaKnown RBP13.27□□□□□ -0.28
SEC13-211ENST00000431352 A0A1W2PPV9 198 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 VSTM2BA6NLU5 285 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 TARM1B6A8C7 271 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 KPNA5O15131 536 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 LRRTM2O43300 516 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 VAPBO95292 243 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 FKBP9O95302 570 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 ONECUT2O95948 504 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 ZGLP1P0C6A0 271 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.293e-22■■■■□ 19.6
SEC13-211ENST00000431352 ARNTP27540 789 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 CMPK1P30085 196 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 CCNFP41002 786 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 TSFMP43897 325 aaKnown RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 EEF1A2Q05639 463 aaKnown RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 TLR1Q15399 786 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 VWA2Q5GFL6 755 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 FAAH2Q6GMR7 532 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 FAM180AQ6UWF9 173 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 SUSD1Q6UWL2 747 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 ISLR2Q6UXK2 745 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 RNF44Q7L0R7 432 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 KCNMB4Q86W47 210 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 LRRC6Q86X45 466 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 MPP5Q8N3R9 675 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 CATSPER1Q8NEC5 780 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 OR2A1Q8NGT9 310 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 NACC2Q96BF6 587 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 MFSD3Q96ES6 412 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 VPS50Q96JG6 964 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 C10orf90Q96M02 699 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 BARD1Q99728 777 aaKnown RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 DPH7Q9BTV6 452 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 ABCF3Q9NUQ8 709 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 BFARQ9NZS9 450 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 ZNF282Q9UDV7 671 aaPredicted RBP13.27□□□□□ -0.29
SEC13-211ENST00000431352 CRYL1Q9Y2S2 319 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 MRFAP1Q9Y605 127 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 ITPR2Q14571 2701 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 DOCK10Q96BY6 2186 aa13.27□□□□□ -0.29
SEC13-211ENST00000431352 KLHL18O94889 574 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 HPP00738 406 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 F7P08709 466 aaPredicted RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 RPA3P35244 121 aaPredicted RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 ARG2P78540 354 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 MFAP5Q13361 173 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 RPS6KA1Q15418 735 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 SIX1Q15475 284 aaPredicted RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 MUM1Q2TAK8 710 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 MRNIPQ6NTE8 343 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 IGFL2Q6UWQ7 119 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 SDCCAG8Q86SQ7 713 aaPredicted RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 RNF10Q8N5U6 811 aaKnown RBP13.26□□□□□ -0.29
SEC13-211ENST00000431352 CSNK1A1LQ8N752 337 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 HMGCLL1Q8TB92 370 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 MAGEC3Q8TD91 643 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 LPGAT1Q92604 370 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 ZFYVE21Q9BQ24 234 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 TSGA10Q9BZW7 698 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 IL1RAPL1Q9NZN1 696 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 SPATA7Q9P0W8 599 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 TRPC4Q9UBN4 977 aa13.26□□□□□ -0.29
SEC13-211ENST00000431352 CREBBPQ92793 2442 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 CROCCQ5TZA2 2017 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 NSG1A0A0A6YYJ2 146 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 OR2A25A4D2G3 310 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 H0YGG7 62 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 VPS26AO75436 327 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 F10P00742 488 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 CELA2AP08217 269 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 CHRM3P20309 590 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 KCNJ1P48048 391 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 VPS41P49754 854 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 ARF3P61204 181 aaPredicted RBP13.25□□□□□ -0.29
SEC13-211ENST00000431352 TRIP13Q15645 432 aaPredicted RBP13.25□□□□□ -0.29
SEC13-211ENST00000431352 HKDC1Q2TB90 917 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 ACSBG2Q5FVE4 666 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 RNF187Q5TA31 235 aaPredicted RBP13.25□□□□□ -0.29
SEC13-211ENST00000431352 B3GNTL1Q67FW5 361 aaPredicted RBP13.25□□□□□ -0.29
SEC13-211ENST00000431352 PRMT9Q6P2P2 845 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 ADCK2Q7Z695 626 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 PPFIBP2Q8ND30 876 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 OR1N1Q8NGS0 311 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 OR9A1PQ8NGU1 263 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 BRIX1Q8TDN6 353 aaKnown RBP13.25□□□□□ -0.29
SEC13-211ENST00000431352 COG1Q8WTW3 980 aa13.25□□□□□ -0.29
SEC13-211ENST00000431352 FAR1Q8WVX9 515 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms