RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 NEIL2Q969S2 332 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 KLHL29Q96CT2 875 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 CXorf40BQ96DE9 158 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 CMTM7Q96FZ5 175 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 FCRL1Q96LA6 429 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 C3orf30Q96M34 536 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 HSPA12BQ96MM6 686 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 SLC6A18Q96N87 628 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 RAB3IPQ96QF0 476 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 FERD3LQ96RJ6 166 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 KCNA7Q96RP8 456 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 RTKNQ9BST9 563 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 SLC25A23Q9BV35 468 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 ATG10Q9H0Y0 220 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 TM9SF3Q9HD45 589 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 CD320Q9NPF0 282 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 ACSS2Q9NR19 701 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 IMP3Q9NV31 184 aaKnown RBP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 AIG1Q9NVV5 245 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 SPATA6Q9NWH7 488 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 C1orf109Q9NX04 203 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 ANKMY1Q9P2S6 941 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 TBC1D29Q9UFV1 150 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 APOBEC3BQ9UH17 382 aaKnown RBP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 ZNF490Q9ULM2 529 aaPredicted RBP8.77□□□□□ -1.01
NR1I3-209ENST00000428574 PSMD13Q9UNM6 376 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 WDR37Q9Y2I8 494 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 RNF11Q9Y3C5 154 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 TIMM22Q9Y584 194 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 PCDHB11Q9Y5F2 797 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 PCDHGA2Q9Y5H1 932 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 KLK4Q9Y5K2 254 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 CSNK1G3Q9Y6M4 447 aa8.77□□□□□ -1.01
NR1I3-209ENST00000428574 LRP4O75096 1905 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 A0A1W2PPV9 198 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 E7EQ34 232 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PSMD12O00232 456 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 YKT6O15498 198 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PRICKLE3O43900 615 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 DFNA5O60443 496 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PRMT3O60678 531 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 LINC00032P0C843 101 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PRPS2P11908 318 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 JAK1P23458 1154 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 ITPKAP23677 461 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PIK3R1P27986 724 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 GSTM5P46439 218 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 C21orf58P58505 322 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 UBE2IP63279 158 aaKnown RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PRDX1Q06830 199 aaKnown RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CYLC2Q14093 348 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CLCA4Q14CN2 919 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 ABRAXAS2Q15018 415 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 NR6A1Q15406 480 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CPSF6Q16630 551 aaKnown RBP eCLIP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 IMPG1Q17R60 797 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 DPY19L1Q2PZI1 675 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SPIN4Q56A73 249 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CACHD1Q5VU97 1274 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PMS2CLQ68D20 193 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 GALNT18Q6P9A2 607 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 NXPE4Q6UWF7 544 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 HACD2Q6Y1H2 254 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 Q6ZSR9 355 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SLC9B2Q86UD5 537 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 GKN2Q86XP6 184 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 FAM129CQ86XR2 697 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 TREML1Q86YW5 311 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SFRP1Q8N474 314 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 OR52E1Q8NGJ3 308 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 DNAJB8Q8NHS0 232 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SELENOMQ8WWX9 145 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 NELL1Q92832 810 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 TSACCQ96A04 125 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SH3KBP1Q96B97 665 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PYCR2Q96C36 320 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SLC7A6OSQ96CW6 309 aaPredicted RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CDK15Q96Q40 435 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 AIF1LQ9BQI0 150 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 BTBD10Q9BSF8 475 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 TMEM168Q9H0V1 697 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 RHBGQ9H310 441 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 LRTM1Q9HBL6 345 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SLC40A1Q9NP59 571 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 PRDM8Q9NQV8 689 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 ARL8BQ9NVJ2 186 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 TAAR2Q9P1P5 351 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 ARMCX1Q9P291 453 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 EIF3LQ9Y262 564 aaKnown RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 CA5BQ9Y2D0 317 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 TDRKHQ9Y2W6 561 aaKnown RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 RRP15Q9Y3B9 282 aaKnown RBP8.76□□□□□ -1.01
NR1I3-209ENST00000428574 FIS1Q9Y3D6 152 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 GPR45Q9Y5Y3 372 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 UNC80Q8N2C7 3258 aa8.76□□□□□ -1.01
NR1I3-209ENST00000428574 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms