RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 TTC1Q99614 292 aa14.28□□□□□ -0.12
ATG4B-209ENST00000425239 MIPEPQ99797 713 aa14.28□□□□□ -0.12
ATG4B-209ENST00000425239 ZNF160Q9HCG1 818 aa14.28□□□□□ -0.12
ATG4B-209ENST00000425239 SLC39A10Q9ULF5 831 aa14.28□□□□□ -0.12
ATG4B-209ENST00000425239 TTC7AQ9ULT0 858 aaPredicted RBP14.28□□□□□ -0.12
ATG4B-209ENST00000425239 RUVBL2Q9Y230 463 aaKnown RBP14.28□□□□□ -0.12
ATG4B-209ENST00000425239 HEATR5BQ9P2D3 2071 aa14.27□□□□□ -0.12
ATG4B-209ENST00000425239 CPAMD8Q8IZJ3 1885 aa14.27□□□□□ -0.12
ATG4B-209ENST00000425239 IGKV1-8A0A0C4DH67 115 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 A0A0J9YVX5 310 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 F8W8V4 182 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 PCDH17O14917 1159 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 JRKO75564 520 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 PRR35P0CG20 571 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 RPS3P23396 243 aaKnown RBP eCLIP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 BDKRB1P46663 353 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 CARSP49589 748 aaKnown RBP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 TNFSF10P50591 281 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 EMP3P54852 163 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 SNRPNP63162 240 aaKnown RBP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 CTSL3PQ5NE16 218 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 PRMT9Q6P2P2 845 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 NDUFAF7Q7L592 441 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 UBL4BQ8N7F7 174 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 TTC29Q8NA56 475 aaPredicted RBP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 OR1N1Q8NGS0 311 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 MARVELD3Q96A59 401 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 CNDP1Q96KN2 507 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 CRB3Q9BUF7 120 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 RAB11FIP5Q9BXF6 653 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 UNKQ9C0B0 810 aaKnown RBP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 EPS8L2Q9H6S3 715 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 CATSPERZQ9NTU4 200 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 PLA2G3Q9NZ20 509 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 GALPQ9UBC7 116 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 ZNF282Q9UDV7 671 aaPredicted RBP14.27□□□□□ -0.13
ATG4B-209ENST00000425239 C3orf18Q9UK00 162 aa14.27□□□□□ -0.13
ATG4B-209ENST00000425239 IGHV1-45A0A0A0MS14 117 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 HNRNPRO43390 633 aaKnown RBP14.26□□□□□ -0.13
ATG4B-209ENST00000425239 WISP2O76076 250 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 ACPPP15309 386 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 SLC26A3P40879 764 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 TTPAP49638 278 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 ZNF75DP51815 510 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 PRAMEP78395 509 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 SIX1Q15475 284 aaPredicted RBP14.26□□□□□ -0.13
ATG4B-209ENST00000425239 PCID2Q5JVF3 399 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 PPP1R21Q6ZMI0 780 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 KBTBD2Q8IY47 623 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 SHISA5Q8N114 240 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 AMER3Q8N944 861 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 MIEF2Q96C03 454 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 MRFAP1L1Q96HT8 127 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 TSSK1BQ9BXA7 367 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 TGIF2Q9GZN2 237 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 RAB6BQ9NRW1 208 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 MRPS2Q9Y399 296 aaKnown RBP14.26□□□□□ -0.13
ATG4B-209ENST00000425239 CAPN6Q9Y6Q1 641 aa14.26□□□□□ -0.13
ATG4B-209ENST00000425239 LOC102723996A0A087X1L8 192 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 A0A1B0GUH1 482 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 H0YGG7 62 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 FOXS1O43638 330 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 CELA2AP08217 269 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 ZSCAN5DPP0CG00 497 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 NMBRP28336 390 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 GRNP28799 593 aaKnown RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 RPL22P35268 128 aaKnown RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 PPARGP37231 505 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 ARF3P61204 181 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 CRADDP78560 199 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 OCA2Q04671 838 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 AARS2Q5JTZ9 985 aaKnown RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 FJX1Q86VR8 437 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 PRSS58Q8IYP2 241 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 SYCE1Q8N0S2 351 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 BCORP1Q8N888 145 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 BRIX1Q8TDN6 353 aaKnown RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 C1orf54Q8WWF1 131 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 NR4A3Q92570 626 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 OR2A5Q96R48 311 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 ZFYVE21Q9BQ24 234 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 DPH7Q9BTV6 452 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 FRMD8P1Q9BZ68 369 aaPredicted RBP14.25□□□□□ -0.13
ATG4B-209ENST00000425239 OLAHQ9NV23 265 aa14.25□□□□□ -0.13
ATG4B-209ENST00000425239 IDSB3KWA1 339 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 FFAR3O14843 346 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 KPNA5O15131 536 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 GPR42O15529 346 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 USP1O94782 785 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 GAS8O95995 478 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 IFNB1P01574 187 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 SERPINA7P05543 415 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 APRTP07741 180 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 CCNFP41002 786 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 PER3P56645 1201 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 KCNK10P57789 538 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 DSG2Q14126 1118 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 PCOLCEQ15113 449 aa14.24□□□□□ -0.13
ATG4B-209ENST00000425239 MUM1Q2TAK8 710 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms