RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 ZNF679Q8IYX0 411 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 CLYBLQ8N0X4 340 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TP53I13Q8NBR0 393 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 KIAA1524Q8TCG1 905 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 GANCQ8TET4 914 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 NEU4Q8WWR8 484 aaPredicted RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 THRSPQ92748 146 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 FAM81BQ96LP2 452 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 OSBPL9Q96SU4 736 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KXD1Q9BQD3 176 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TRMT61BQ9BVS5 477 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 CDT1Q9H211 546 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 UPF2Q9HAU5 1272 aaKnown RBP2.49□□□□□ -2.01
MCF2-204ENST00000414978 ASAH2Q9NR71 780 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 KLHL13Q9P2N7 655 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 RHCGQ9UBD6 479 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 SPASTQ9UBP0 616 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 STK17AQ9UEE5 414 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 GRID1Q9ULK0 1009 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 PADI2Q9Y2J8 665 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 ZHX2Q9Y6X8 837 aa2.49□□□□□ -2.01
MCF2-204ENST00000414978 TDRD15B5MCY1 1934 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 MUC6Q6W4X9 2439 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 LNP1A1A4G5 178 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 XKRY2A2RUG3 117 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PMS2P1A4D2B8 440 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 C9orf118A6NHY6 69 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SLC33A1O00400 549 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 MGST3O14880 152 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CHADO15335 359 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 POP4O95707 220 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 ENO1P06733 434 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 ZCCHC18P0CG32 403 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PCNAP12004 261 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CD9P21926 228 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ASMTP46597 345 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PITPNBP48739 271 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 UCP2P55851 309 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 BACE1P56817 501 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 KIAA1024LP59773 190 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 DMPKQ09013 629 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PKP1Q13835 747 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CARTPTQ16568 116 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 C6orf136Q5SQH8 315 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 MFSD7Q6UXD7 560 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SYVN1Q86TM6 617 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 RFX6Q8HWS3 928 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 LCORLQ8N3X6 602 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 OR2T3Q8NH03 318 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SUSD6Q92537 303 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 EXTL1Q92935 676 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 DTD2Q96FN9 168 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 FAM84BQ96KN1 310 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 SFXN2Q96NB2 322 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TGS1Q96RS0 853 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 CSF3RQ99062 836 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PCYT2Q99447 389 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SH3GL2Q99962 352 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 DCTPP1Q9H773 170 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 MMP25Q9NPA2 562 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 AIPL1Q9NZN9 384 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CWC15Q9P013 229 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 TRPC4Q9UBN4 977 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PLA2G4CQ9UP65 541 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ITM2BQ9Y287 266 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TMEM184BQ9Y519 407 aaPredicted RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 TNRC6BQ9UPQ9 1833 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 TRIM49BA6NDI0 452 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TMEM202A6NGA9 273 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 RFXAPO00287 272 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CTAGE5O15320 804 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ADCY5O95622 1261 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SLC16A8O95907 504 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 LCATP04180 440 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 HEXAP06865 529 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ANKRD34CP0C6C1 535 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SMIM18P0DKX4 95 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PDHBP11177 359 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 AHCYP23526 432 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 MPZP25189 248 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PSMB4P28070 264 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ARHGAP25P42331 645 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 MAGEA9P43362 315 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PPP3CCP48454 512 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 GPR143P51810 404 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ADPRHP54922 357 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 VCPP55072 806 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 RAPSNQ13702 412 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ICAM4Q14773 271 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PHLDA2Q53GA4 152 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 USP39Q53GS9 565 aaKnown RBP2.48□□□□□ -2.01
MCF2-204ENST00000414978 ASPHD1Q5U4P2 390 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TCERG1LQ5VWI1 586 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 CASC4Q6P4E1 433 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 TMEM184AQ6ZMB5 413 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ARMCX2Q7L311 632 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 C17orf47Q8NEP4 570 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 ACVR1CQ8NER5 493 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 SLC44A1Q8WWI5 657 aa2.48□□□□□ -2.01
MCF2-204ENST00000414978 PGAM5Q96HS1 289 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms