RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MERTKQ12866 999 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 GLRA4Q5JXX5 417 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZFP1Q6P2D0 407 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 IZUMO2Q6UXV1 221 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 GPRIN3Q6ZVF9 776 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ARCQ7LC44 396 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CTU1Q7Z7A3 348 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 FERMT1Q9BQL6 677 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 SEMA4CQ9C0C4 833 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ASCC2Q9H1I8 757 aaPredicted RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 C12orf65Q9H3J6 166 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ARHGEF4Q9NR80 690 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 FZD1Q9UP38 647 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 ZFR2Q9UPR6 939 aaKnown RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 GPR55Q9Y2T6 319 aaPredicted RBP6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 CPQQ9Y646 472 aa6.43□□□□□ -1.38
TM9SF4-202ENST00000398022 A0A0A0MRY4 1105 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CCDC195A0A1B0GUA6 201 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TCRBV5S1A1TA0A578 114 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TTLL8A6PVC2 850 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 E5RI56 91 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ADCY6O43306 1168 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 SERPINA6P08185 405 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CBR1P16152 277 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 YWHAQP27348 245 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CRHR1P34998 444 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ARL2P36404 184 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 OMPP47874 163 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 OAZ1P54368 228 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 NAGLUP54802 743 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 BAMBIQ13145 260 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TOP3AQ13472 1001 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CBFBQ13951 182 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 GAS6Q14393 721 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 NOMO1Q15155 1222 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 STXBP2Q15833 593 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PTPN20Q4JDL3 420 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZMAT1Q5H9K5 638 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 HEPHL1Q6MZM0 1159 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PSRC1Q6PGN9 363 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 RIPOR1Q6ZS17 1223 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FRA10AC1Q70Z53 315 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ALYREFQ86V81 257 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 RASGRP3Q8IV61 690 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF596Q8TC21 504 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TCEAL3Q969E4 200 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FBXW5Q969U6 566 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TEX264Q9Y6I9 313 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KAT6AQ92794 2004 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM82A0PJX8 343 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PQLC2LA1A4F0 135 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 STBD1O95210 358 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KCNK5O95279 499 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KITP10721 976 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 MSH3P20585 1137 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TUBG1P23258 451 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PLK1P53350 603 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PSPHP78330 225 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 MTMR2Q13614 643 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TAZQ16635 292 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 UBXN11Q5T124 520 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FAM102AQ5T9C2 384 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZDHHC20Q5W0Z9 365 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 RWDD4Q6NW29 188 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 SNX20Q7Z614 316 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ZNF276Q8N554 614 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KDM1BQ8NB78 822 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 RBM15BQ8NDT2 890 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 REPS1Q96D71 796 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FEM1CQ96JP0 617 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KLHL5Q96PQ7 755 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 LBHD1Q9BQE6 289 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TUBG2Q9NRH3 451 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 GSN-AS1Q9NRJ2 163 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 NCKIPSDQ9NZQ3 722 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TSPAN16Q9UKR8 245 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 PCDHB8Q9UN66 801 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TCRBV7S3A2A0A539 114 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 C3orf70A6NLC5 250 aaPredicted RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TRUB2O95900 331 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ALPPP05187 535 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 APRTP07741 180 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 LYNP07948 512 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ALPPL2P10696 532 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 NR2C1P13056 603 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 GPD1P21695 349 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TGM2P21980 687 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 FEN1P39748 380 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 WNT7BP56706 349 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 MED21Q13503 144 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KCNJ11Q14654 390 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CNN3Q15417 329 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 TMEM35AQ53FP2 167 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KLHL26Q53HC5 615 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 ATF7IP2Q5U623 682 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 CYB5R2Q6BCY4 276 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 DENND1BQ6P3S1 775 aa6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 KYAT3Q6YP21 454 aaKnown RBP6.42□□□□□ -1.38
TM9SF4-202ENST00000398022 SLC25A41Q8N5S1 370 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms