RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 GOLGA7Q7Z5G4 137 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 OR5AR1Q8NGP9 310 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 CCL4L1Q8NHW4 92 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 ATL1Q8WXF7 558 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 PPP1R36Q96LQ0 422 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 C12orf66Q96MD2 445 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 TNFRSF12AQ9NP84 129 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 MID1IP1Q9NPA3 183 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 PRDM8Q9NQV8 689 aa18.74■□□□□ 0.59
PDLIM2-204ENST00000397760 SMIM31A0A1B0GVY4 71 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 K7EPI3 171 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 UBDO15205 165 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 GTF2H2Q13888 395 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 RBBP7Q16576 425 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 ZNF542PQ5EBM4 170 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 GTF2H2CQ6P1K8 395 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 LPCAT2Q7L5N7 544 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 IQCHQ86VS3 1027 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 BHLHE22Q8NFJ8 381 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 OR9A1PQ8NGU1 263 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 DNASE2BQ8WZ79 361 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 DUS3LQ96G46 650 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 INSM2Q96T92 566 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 ATG10Q9H0Y0 220 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 STOX2Q9P2F5 926 aaPredicted RBP18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 G3BP2Q9UN86 482 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 ANGPTL3Q9Y5C1 460 aa18.73■□□□□ 0.59
PDLIM2-204ENST00000397760 ENO4A6NNW6 628 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 SLC16A8O95907 504 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 RPN2P04844 631 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 ACTR1BP42025 376 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 ACTR1AP61163 376 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 CLCA4Q14CN2 919 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PTCHD3Q3KNS1 767 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 UAP1L1Q3KQV9 507 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 WDR45BQ5MNZ6 344 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PARGQ86W56 976 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 DCUN1D3Q8IWE4 304 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 DTWD2Q8NBA8 298 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 OR5K2Q8NHB8 316 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 C1orf216Q8TAB5 229 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 SH3GL3Q99963 347 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 SLC25A23Q9BV35 468 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TCEAL2Q9H3H9 227 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 SLC32A1Q9H598 525 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 NOL11Q9H8H0 719 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 KLF15Q9UIH9 416 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TMEM233B4DJY2 109 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TLR4O00206 839 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PSMD12O00232 456 aaPredicted RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 CFLARO15519 480 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 C8BP07358 591 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 IMPA1P29218 277 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 DPP6P42658 865 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 SLC6A12P48065 614 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PSME3P61289 254 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 MRPS22P82650 360 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 MS4A2Q01362 244 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 ILF3Q12906 894 aaKnown RBP eCLIP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TRIM25Q14258 630 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 AGTRAPQ6RW13 159 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 RAD51AP1Q96B01 352 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PYCR2Q96C36 320 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TRIT1Q9H3H1 467 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 CAAP1Q9H8G2 361 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 IPPKQ9H8X2 491 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 IMP3Q9NV31 184 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TBC1D29Q9UFV1 150 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TDRKHQ9Y2W6 561 aaKnown RBP18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 FIS1Q9Y3D6 152 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 TRAF6Q9Y4K3 522 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 PCDHGA7Q9Y5G6 932 aa18.72■□□□□ 0.59
PDLIM2-204ENST00000397760 A0A1B0GTL3 188 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 GIPC1O14908 333 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 WDR47O94967 919 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 SNRPB2P08579 225 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 CD1EP15812 388 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 EPB42P16452 691 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 PKNOX1P55347 436 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 PRKG2Q13237 762 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 SRSF5Q13243 272 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 FASTKQ14296 549 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 DUS1LQ6P1R4 473 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 LRRC70Q7Z2Q7 622 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 NRROSQ86YC3 692 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 TBC1D21Q8IYX1 336 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 ATP6V1E2Q96A05 226 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 FERD3LQ96RJ6 166 aa18.71■□□□□ 0.59
PDLIM2-204ENST00000397760 OR52A4PA6NMU1 304 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 BBIP1A8MTZ0 92 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 OR7A17O14581 309 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 DNAJA2O60884 412 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 FGF4P08620 206 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PRDX3P30048 256 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 HALP42357 657 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 PIK3CGP48736 1102 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 BLKP51451 505 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 NAE1Q13564 534 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 ABRAXAS1Q6UWZ7 409 aa18.7■□□□□ 0.58
PDLIM2-204ENST00000397760 WASH2PQ6VEQ5 465 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms