RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 TESMINQ9Y4I5 508 aa14.33□□□□□ -0.11
CCNF-202ENST00000397066 OARD1Q9Y530 152 aa14.33□□□□□ -0.11
CCNF-202ENST00000397066 HSPE1-MOB4S4R3N1 261 aa14.33□□□□□ -0.11
CCNF-202ENST00000397066 CAMK2GQ13555 558 aaPredicted RBP14.33□□□□□ -0.12
CCNF-202ENST00000397066 STEAP3Q658P3 488 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 LYSMD2Q8IV50 215 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 C10orf111Q8N326 155 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 MS4A4AQ96JQ5 239 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 ADPRHL2Q9NX46 363 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 EHD3Q9NZN3 535 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 DUSP12Q9UNI6 340 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 ISPDA4D126 451 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 WDR47O94967 919 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 RPLP0P05388 317 aaKnown RBP14.33□□□□□ -0.12
CCNF-202ENST00000397066 PRPS2P11908 318 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 CXCR4P61073 352 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 SEMG2Q02383 582 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 KIAA0040Q15053 153 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 Q6ZPB1 254 aaPredicted RBP14.33□□□□□ -0.12
CCNF-202ENST00000397066 LINC00299Q6ZSB3 139 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 FAM83FQ8NEG4 500 aaPredicted RBP14.33□□□□□ -0.12
CCNF-202ENST00000397066 EGLN2Q96KS0 407 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 ZFYVE1Q9HBF4 777 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 IL1RAPQ9NPH3 570 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 SPATA7Q9P0W8 599 aa14.33□□□□□ -0.12
CCNF-202ENST00000397066 M0QX08 132 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 SUV39H1O43463 412 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ZNF24P17028 368 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 ZNF181Q2M3W8 571 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ARTNQ5T4W7 220 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 SNX20Q7Z614 316 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 SP140LQ9H930 580 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ZNF556Q9HAH1 456 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 GKN1Q9NS71 199 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 PCDHGB1Q9Y5G3 927 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 AGAP5A6NIR3 686 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 AGRPO00253 132 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ITPKAP23677 461 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 TACR1P25103 407 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 CLDN8P56748 225 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 VLDLRP98155 873 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 TSTA3Q13630 321 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 NDUFA5Q16718 116 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 CAPN13Q6MZZ7 669 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 TMC5Q6UXY8 1006 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 CCDC97Q96F63 343 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 TSEN34Q9BSV6 310 aaKnown RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 BBS2Q9BXC9 721 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 SLIRPQ9GZT3 109 aaKnown RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 IL37Q9NZH6 218 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 PNMA8CA0A1B0GUJ8 204 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 MAGEB17A8MXT2 336 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 JUNDP17535 347 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 KDELR2P33947 212 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 LIPAP38571 399 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 MED22Q15528 200 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 TAF1CQ15572 869 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 VMACQ2NL98 169 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 PROX2Q3B8N5 592 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 TRIM60Q495X7 471 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 CCBE1Q6UXH8 406 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 GATAD2AQ86YP4 633 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 LKAAEAR1Q8TD35 194 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 FCGR1BQ92637 280 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 KCNS3Q9BQ31 491 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ACPTQ9BZG2 426 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 ANKHQ9HCJ1 492 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 TRPS1Q9UHF7 1281 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 NAALAD2Q9Y3Q0 740 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 BPTFQ12830 3046 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 POU1F1P28069 291 aa14.32□□□□□ -0.12
CCNF-202ENST00000397066 THOC7Q6I9Y2 204 aaKnown RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 CAB39Q9Y376 341 aaPredicted RBP14.32□□□□□ -0.12
CCNF-202ENST00000397066 LOC110117498-PIK3R3F6TDL0 507 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 NUAK1O60285 661 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
CCNF-202ENST00000397066 HNRNPFP52597 415 aaKnown RBP14.31□□□□□ -0.12
CCNF-202ENST00000397066 CASP9P55211 416 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 RING1Q06587 406 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 KDM4DQ6B0I6 523 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 PSD4Q8NDX1 1056 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 MYO19Q96H55 970 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 RAPGEFL1Q9UHV5 662 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 PRSS21Q9Y6M0 314 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 OAZ2O95190 189 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 DNTTP04053 509 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 RRM2P31350 389 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 PHC1P78364 1004 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 BOP1Q14137 746 aaKnown RBP14.31□□□□□ -0.12
CCNF-202ENST00000397066 UBE2R2Q712K3 238 aaPredicted RBP14.31□□□□□ -0.12
CCNF-202ENST00000397066 ATL1Q8WXF7 558 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 IL17CQ9P0M4 197 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 SLC45A1Q9Y2W3 748 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 TNFRSF11BO00300 401 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 PCDHGA12O60330 932 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 CYP7B1O75881 506 aa14.31□□□□□ -0.12
CCNF-202ENST00000397066 C9P02748 559 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms