RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 ACOT13Q9NPJ3 140 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 SNX6Q9UNH7 406 aa15.27■□□□□ 0.03
HOXA3-202ENST00000396352 MICAL3Q7RTP6 2002 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 GFRA2O00451 464 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 KCNK5O95279 499 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 FADS2O95864 444 aaKnown RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 DNAJA1P31689 397 aaKnown RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 CCR7P32248 378 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 NCS1P62166 190 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 B4GALNT1Q00973 533 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 MAD2L1BPQ15013 274 aaPredicted RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 CDKL4Q5MAI5 379 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 CCDC81Q6ZN84 652 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 LRRC70Q7Z2Q7 622 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 TTC29Q8NA56 475 aaPredicted RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 OR6Q1Q8NGQ2 317 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 ERVK-11Q9UQG0 969 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 NUP214P35658 2090 aaPredicted RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 TMEM88BA6NKF7 163 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 NPIPB8E9PQR5 432 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PRAMEF4O60810 478 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 AMD1P17707 334 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 FPR1P21462 350 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 TGM1P22735 817 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 KRT20P35900 424 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PLD1Q13393 1074 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 DGCR6Q14129 220 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 GPNMBQ14956 572 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 DGUOKQ16854 277 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PRAMEF9Q5VWM5 478 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 ZCCHC8Q6NZY4 707 aaKnown RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 MSANTD1Q6ZTZ1 278 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PTOV1Q86YD1 416 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PHF10Q8WUB8 498 aaKnown RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 BHMTQ93088 406 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 SIGLEC11Q96RL6 698 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 SCN3BQ9NY72 215 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 PDP1Q9P0J1 537 aaPredicted RBP15.26■□□□□ 0.03
HOXA3-202ENST00000396352 TMED5Q9Y3A6 229 aa15.26■□□□□ 0.03
HOXA3-202ENST00000396352 E9PQ18 207 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 GREM1O60565 184 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NBNO60934 754 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 FABP3P05413 133 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 PSMB9P28065 219 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 INAQ16352 499 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 VMACQ2NL98 169 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NEK5Q6P3R8 708 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 HOMEZQ8IX15 550 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 FAM9CQ8IZT9 166 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 CBARPQ8N350 705 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ZNF540Q8NDQ6 660 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ADAMTS19Q8TE59 1207 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NELL1Q92832 810 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 UPF1Q92900 1129 aaKnown RBP eCLIP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 VOPP1Q96AW1 172 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 APOL4Q9BPW4 351 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 SIRT5Q9NXA8 310 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NPIPB15A6NHN6 443 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 TGFBR2P37173 567 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NSG1P42857 185 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 SLC6A12P48065 614 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ARHGDIAP52565 204 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 SEMG2Q02383 582 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 CDH18Q13634 790 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 HIST2H2ACQ16777 129 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 DUOXA1Q1HG43 343 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 TTC23LQ6PF05 361 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 L3MBTL4Q8NA19 623 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 HJURPQ8NCD3 748 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 APOLD1Q96LR9 279 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 PSD2Q9BQI7 771 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ABCG8Q9H221 673 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ATAD3AQ9NVI7 634 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 AFF4Q9UHB7 1163 aaKnown RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 CLIC1O00299 241 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 RGS10O43665 173 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 SCN2BO60939 215 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 WBP4O75554 376 aaKnown RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ACPPP15309 386 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ENGP17813 658 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 MAPK1P28482 360 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 HALP42357 657 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 KIR3DL1P43629 444 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 WNT3P56703 355 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 ZXDBP98169 803 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 PAGE2BQ5JRK9 111 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 NCCRP1Q6ZVX7 275 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 UBE2R2Q712K3 238 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 RNF180Q86T96 592 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 TSPYL5Q86VY4 417 aaPredicted RBP15.25■□□□□ 0.03
HOXA3-202ENST00000396352 CADM3Q8N126 398 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 RNF175Q8N4F7 328 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 DBF4BQ8NFT6 615 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 UBE2FQ969M7 185 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 PYCR2Q96C36 320 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 FCRL1Q96LA6 429 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 SLC22A12Q96S37 553 aa15.25■□□□□ 0.03
HOXA3-202ENST00000396352 REXO4Q9GZR2 422 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms