RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 DGKEP52429 567 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 NKX2-5P52952 324 aaPredicted RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 MRPL58Q14197 206 aaKnown RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 ATG9BQ674R7 924 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 ANGPTL8Q6UXH0 198 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 MFSD4AQ8N468 514 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 OR52J3Q8NH60 311 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 PIH1D2Q8WWB5 315 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 KCNC2Q96PR1 638 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 CD84Q9UIB8 345 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 SLC22A14Q9Y267 594 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 B3GNT3Q9Y2A9 372 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 GLYATL1P3A0A0U1RQE8 302 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 FAM220BPB1ANY3 271 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 H7C0S8 307 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 RGS10O43665 173 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 PGLSO95336 258 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 EBLN1P0CF75 366 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 DBTP11182 482 aaKnown RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 RYKP34925 604 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 CLK1P49759 484 aaKnown RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 PRSS36Q5K4E3 855 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 COLEC12Q5KU26 742 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 SHQ1Q6PI26 577 aaKnown RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 TRIM46Q7Z4K8 759 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 MTERF1Q99551 399 aaKnown RBP20.4■□□□□ 0.86
COL23A1-201ENST00000390654 KCNH6Q9H252 994 aa20.4■□□□□ 0.86
COL23A1-201ENST00000390654 CLIC1O00299 241 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 ERN1O75460 977 aaKnown RBP20.39■□□□□ 0.85
COL23A1-201ENST00000390654 TPTEP56180 551 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 IRF5Q13568 498 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 CDH18Q13634 790 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 RNF180Q86T96 592 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 ZHX1-C8orf76Q96EF9 292 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 HSH2DQ96JZ2 352 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 MAGEE1Q9HCI5 957 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 ACOT13Q9NPJ3 140 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 THG1LQ9NWX6 298 aaKnown RBP20.39■□□□□ 0.85
COL23A1-201ENST00000390654 UNC80Q8N2C7 3258 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 CHD5Q8TDI0 1954 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 CDH23Q9H251 3354 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 LOC100506127A0A0U1RQW1 187 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 EVPLLA8MZ36 301 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 PCDHGA12O60330 932 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 OPN1SWP03999 348 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 ABCB1P08183 1280 aaPredicted RBP20.39■□□□□ 0.85
COL23A1-201ENST00000390654 HOXA9P31269 272 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 GPRC6AQ5T6X5 926 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 DEFB128Q7Z7B8 93 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 CALHM3Q86XJ0 350 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 PCSK9Q8NBP7 692 aaKnown RBP20.39■□□□□ 0.85
COL23A1-201ENST00000390654 TTPALQ9BTX7 342 aa20.39■□□□□ 0.85
COL23A1-201ENST00000390654 FPGTO14772 594 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 SLC22A1O15245 554 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 TBX1O43435 398 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CNOT3O75175 753 aaKnown RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 ANXA5P08758 320 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 PTPN6P29350 595 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 RAB15P59190 212 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 PTCHD3Q3KNS1 767 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CCSAPQ6IQ19 270 aaPredicted RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 TPGS1Q6ZTW0 290 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 SNX20Q7Z614 316 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 OR6Q1Q8NGQ2 317 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 RUBCNLQ9H714 662 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 RMND5AQ9H871 391 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 STARD7Q9NQZ5 370 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 GIN1Q9NXP7 522 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 TSC22D4Q9Y3Q8 395 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 IGHA2P01877 340 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 ACRV1P26436 265 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CCL23P55773 120 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 RPP38P78345 283 aaKnown RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 TCTN1Q2MV58 587 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CERS6Q6ZMG9 384 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 UBE2R2Q712K3 238 aaPredicted RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 ZSWIM9Q86XI8 627 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 VRK3Q8IV63 474 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 DYNC2LI1Q8TCX1 351 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 ZNF300Q96RE9 604 aaPredicted RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 EFCAB9A8MZ26 197 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 MYO1DO94832 1006 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 FABP3P05413 133 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CLDN8P56748 225 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 SMAD3P84022 425 aaKnown RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 C5orf22Q49AR2 442 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 SPOUT1Q5T280 376 aaKnown RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 ADNP2Q6IQ32 1131 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 GPR26Q8NDV2 337 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 SETD9Q8NE22 299 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 MCFD2Q8NI22 146 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 DNASE1L2Q92874 299 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 FOXJ1Q92949 421 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 YIPF6Q96EC8 236 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 CAB39Q9Y376 341 aaPredicted RBP20.38■□□□□ 0.85
COL23A1-201ENST00000390654 NAALAD2Q9Y3Q0 740 aa20.38■□□□□ 0.85
COL23A1-201ENST00000390654 PRAMEF4O60810 478 aa20.37■□□□□ 0.85
COL23A1-201ENST00000390654 GTF2E2P29084 291 aaKnown RBP20.37■□□□□ 0.85
COL23A1-201ENST00000390654 LIPAP38571 399 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms