RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 FASTKQ14296 549 aaKnown RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 SF1Q15637 639 aaKnown RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 MANEAQ5SRI9 462 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 CEP128Q6ZU80 1094 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 VASH2Q86V25 355 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 ZC3HC1Q86WB0 502 aaKnown RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 CACNA2D3Q8IZS8 1091 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 IL22RA1Q8N6P7 574 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 PPM1NQ8N819 430 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 C19orf47Q8N9M1 422 aaKnown RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 FLVCR1-AS1Q8TAF5 88 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 ASB11Q8WXH4 323 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 N4BP2L2Q92802 583 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 NKD1Q969G9 470 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 ZNF501Q96CX3 271 aaPredicted RBP8.9□□□□□ -0.98
HMGN1-202ENST00000380747 TCTN2Q96GX1 697 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 VPS39Q96JC1 886 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 MIPEPQ99797 713 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 RHOXF2Q9BQY4 288 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 RHOJQ9H4E5 214 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 LRRC4CQ9HCJ2 640 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 ABCF3Q9NUQ8 709 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 ADAMTS6Q9UKP5 1117 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 BTRCQ9Y297 605 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 KLHL20Q9Y2M5 609 aa8.9□□□□□ -0.98
HMGN1-202ENST00000380747 KIF26BQ2KJY2 2108 aa8.9□□□□□ -0.99
HMGN1-202ENST00000380747 USP9YO00507 2555 aaPredicted RBP8.9□□□□□ -0.99
HMGN1-202ENST00000380747 PIKFYVEQ9Y2I7 2098 aa8.9□□□□□ -0.99
HMGN1-202ENST00000380747 PABPN1LA6NDY0 278 aaKnown RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF839A8K0R7 811 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TMEM150CB9EJG8 249 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CDK2AP1O14519 115 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 SCRG1O75711 98 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TIAF1O95411 115 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 NTRK1P04629 796 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 C8GP07360 202 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 MAGP20916 626 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 PSMB5P28074 263 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 RPA3P35244 121 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 GP5P40197 560 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 SRSF6Q13247 344 aaKnown RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF460Q14592 562 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 ZIC1Q15915 447 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CYP2A13Q16696 494 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 KBTBD12Q3ZCT8 623 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 PWWP2BQ6NUJ5 590 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 SUSD1Q6UWL2 747 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 C6orf15Q6UXA7 325 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CCDC81Q6ZN84 652 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CDHR3Q6ZTQ4 885 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CYS1Q717R9 158 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TIPARPQ7Z3E1 657 aaKnown RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 DTX1Q86Y01 620 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TMEM126BQ8IUX1 230 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 IFT20Q8IY31 132 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 SYTL1Q8IYJ3 562 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 NLGN4XQ8N0W4 816 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 GALNT6Q8NCL4 622 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 FBXO15Q8NCQ5 510 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 PPFIBP2Q8ND30 876 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 LRRN4CLQ8ND94 238 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 NLGN4YQ8NFZ3 816 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 OR8K5Q8NH50 307 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 MCOLN3Q8TDD5 553 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 SMPDL3AQ92484 453 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 MRRFQ96E11 262 aaKnown RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CCNL2Q96S94 520 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 FMO2Q99518 471 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 CPNE1Q99829 537 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 ACAT2Q9BWD1 397 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 FAM129AQ9BZQ8 928 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TSPYL1Q9H0U9 437 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 FAM60AQ9NP50 221 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 INTS7Q9NVH2 962 aaKnown RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 IRAK4Q9NWZ3 460 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 NINJ2Q9NZG7 142 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 IL17BQ9UHF5 180 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 PILRAQ9UKJ1 303 aa8.89□□□□□ -0.99
HMGN1-202ENST00000380747 TMEM184BQ9Y519 407 aaPredicted RBP8.89□□□□□ -0.99
HMGN1-202ENST00000380747 A0A1W2PPV9 198 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 GFYI3L273 518 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SLC16A5O15375 505 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 PRICKLE3O43900 615 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 FAM155BO75949 473 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 TSPAN12O95859 305 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 DLGAP3O95886 979 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 SLC16A8O95907 504 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HIST1H2AGP0C0S8 130 aaPredicted RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ERGP11308 486 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HIST1H2ADP20671 130 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 CMPK1P30085 196 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 PHBP35232 272 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 HSD17B2P37059 387 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ITGA1P56199 1179 aa8.88□□□□□ -0.99
HMGN1-202ENST00000380747 ILF2Q12905 390 aaKnown RBP8.88□□□□□ -0.99
HMGN1-202ENST00000380747 USP10Q14694 798 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms