RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 VPS29Q9UBQ0 182 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CIDEBQ9UHD4 219 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SCML1Q9UN30 329 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DYRK1BQ9Y463 629 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 A0A1W2PQF6 199 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ARPC2O15144 300 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PRMT3O60678 531 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ADAM23O75077 832 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 EGFP01133 1207 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DNTTP04053 509 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NPPBP16860 134 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 KELP23276 732 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 HNRNPFP52597 415 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 GTF2A1P52655 376 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C21orf58P58505 322 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TAP2Q03519 686 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DMPKQ09013 629 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 INPP5AQ14642 412 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MAPKAPK3Q16644 382 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ATG9BQ674R7 924 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NOXRED1Q6NXP6 359 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TICAM1Q8IUC6 712 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RIMKLAQ8IXN7 391 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SETD7Q8WTS6 366 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NUDT8Q8WV74 236 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 NEIL2Q969S2 332 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RAD51AP1Q96B01 352 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 REPS1Q96D71 796 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C11orf24Q96F05 449 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMEM74Q96NL1 305 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PKP2Q99959 881 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 EFHD1Q9BUP0 239 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 EFCAB11Q9BUY7 163 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SGK2Q9HBY8 427 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PHPT1Q9NRX4 125 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ARMC1Q9NVT9 282 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SLC23A2Q9UGH3 650 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MAN2B2Q9Y2E5 1009 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SNX13Q9Y5W8 968 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RPN2P04844 631 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ERGP11308 486 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MYCLP1P12525 358 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 HOXB2P14652 356 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DRD1P21728 446 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 GRIA3P42263 894 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SFT2D3Q587I9 215 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 OR7G3Q8NG95 312 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 APOLD1Q96LR9 279 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C1QTNF7Q9BXJ2 289 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 C8orf33Q9H7E9 229 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PREBQ9HCU5 417 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CCDC177Q9NQR7 707 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RUVBL1Q9Y265 456 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AP3M1Q9Y2T2 418 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PRKAB1Q9Y478 270 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DTNAQ9Y4J8 743 aa17.41■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PI15O43692 258 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 COL9A1P20849 921 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ADPRHP54922 357 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 SGCGQ13326 291 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ARHGAP19Q14CB8 494 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 DPY19L1Q2PZI1 675 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 AASDHQ4L235 1098 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 IRGCQ6NXR0 463 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 MED27Q6P2C8 311 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TMPRSS11BQ86T26 416 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 LAS2Q8IYD9 372 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CLHC1Q8NHS4 586 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ASB12Q8WXK4 309 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PPM1MQ96MI6 270 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 BTBD9Q96Q07 612 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRIM8Q9BZR9 551 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 RMI1Q9H9A7 625 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 CCM2LQ9NUG4 571 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 ACSL5Q9ULC5 683 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 FZD4Q9ULV1 537 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 PCDHB3Q9Y5E6 796 aa17.4■□□□□ 0.38
HLA-DQB1-201ENST00000374943 TRBV5-3A0A0A0MS03 114 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 A0A1W2PQU0 124 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RNGTTO60942 597 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PAK4O96013 591 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 C1GALT1C1LP0DN25 315 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PRPS1L1P21108 318 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TACR1P25103 407 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HSD17B2P37059 387 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MRPS21P82921 87 aaKnown RBP17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MTAPQ13126 283 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LAPTM5Q13571 262 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PON2Q15165 354 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LRRC36Q1X8D7 754 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GRAMD1BQ3KR37 738 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PAGE2BQ5JRK9 111 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LRIF1Q5T3J3 769 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LCTLQ6UWM7 567 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 HORMAD1Q86X24 394 aa17.39■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PROSER1Q86XN7 944 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms