RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 SLC5A10A0PJK1 596 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 NPIPB8E9PQR5 432 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 ALBP02768 609 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 PCSK6P29122 969 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 SLC5A2P31639 672 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 PRLHRP49683 370 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 ALDH3A2P51648 485 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 PPP1R8Q12972 351 aaKnown RBP18.17■□□□□ 0.5
USP49-202ENST00000373010 LIPJQ5W064 366 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 GPR149Q86SP6 731 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 SYT12Q8IV01 421 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 CDC26Q8NHZ8 85 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 WDR20Q8TBZ3 569 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 NXPE3Q969Y0 559 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 VPS35Q96QK1 796 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 PKP4Q99569 1192 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 OSBPL6Q9BZF3 934 aa18.17■□□□□ 0.5
USP49-202ENST00000373010 DCAF13Q9NV06 445 aaKnown RBP18.17■□□□□ 0.5
USP49-202ENST00000373010 A0A087WXM4 84 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 SERTM1A2A2V5 107 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 RFXANKO14593 260 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 SLC9A3R1O14745 358 aaPredicted RBP18.16■□□□□ 0.5
USP49-202ENST00000373010 SLC16A8O95907 504 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 SERPINA1P01009 418 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 ALPLP05186 524 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 HLA-EP13747 358 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 HOXA9P31269 272 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 VIPR2P41587 438 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 ANKRD34AQ69YU3 496 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 ERAP2Q6P179 960 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 DOK6Q6PKX4 331 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 FAM9CQ8IZT9 166 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 LEMD2Q8NC56 503 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 VN1R2Q8NFZ6 395 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 DNAJB8Q8NHS0 232 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 GLMNQ92990 594 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 ZNF707Q96C28 371 aaPredicted RBP18.16■□□□□ 0.5
USP49-202ENST00000373010 HHIPQ96QV1 700 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 SMURF2Q9HAU4 748 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 DNAJB9Q9UBS3 223 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 AP3M1Q9Y2T2 418 aa18.16■□□□□ 0.5
USP49-202ENST00000373010 PLK4O00444 970 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 WNT9AO14904 365 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 SRPRAP08240 638 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 HNRNPA1P09651 372 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP49-202ENST00000373010 KIR3DL1P43629 444 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 PPIGQ13427 754 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP49-202ENST00000373010 KCNC3Q14003 757 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 UGT8Q16880 541 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 TMEM240Q5SV17 173 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 CSGALNACT1Q8TDX6 532 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 ZFYVE19Q96K21 471 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 CCDC138Q96M89 665 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 FAM83CQ9BQN1 747 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 DDX18Q9NVP1 670 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 VPS29Q9UBQ0 182 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 TCF20Q9UGU0 1960 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 TRIM64CA6NLI5 447 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 G3V2T6 193 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 QSOX1O00391 747 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 SPINT1O43278 529 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 CATP04040 527 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 IMPA1P29218 277 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 YAP1P46937 504 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 ST8SIA6P61647 398 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 CSTF3Q12996 717 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 RBM23Q86U06 439 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 NELL1Q92832 810 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 LRIG1Q96JA1 1093 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 FCRL1Q96LA6 429 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 MUS81Q96NY9 551 aa18.15■□□□□ 0.5
USP49-202ENST00000373010 THG1LQ9NWX6 298 aaKnown RBP18.15■□□□□ 0.5
USP49-202ENST00000373010 TRIM64A6NGJ6 449 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 SOBPA7XYQ1 873 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 PRRT4C9JH25 899 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 K7ESM1 405 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 NPC1O15118 1278 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 UGDHO60701 494 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 RETP07949 1114 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 THRBP10828 461 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 EFNA1P20827 205 aaPredicted RBP18.14■□□□□ 0.5
USP49-202ENST00000373010 SLC6A11P48066 632 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 FPGSQ05932 587 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 ANKRD26P1Q6NSI1 321 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 RTL10Q7L3V2 364 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 ZDHHC13Q8IUH4 622 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 LMNTD1Q8N9Z9 388 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 OR52E4Q8NGH9 312 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 ERLEC1Q96DZ1 483 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 MAGEB10Q96LZ2 347 aaPredicted RBP18.14■□□□□ 0.5
USP49-202ENST00000373010 SGK2Q9HBY8 427 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 PRM3Q9NNZ6 103 aa18.14■□□□□ 0.5
USP49-202ENST00000373010 TUBA8Q9NY65 449 aaPredicted RBP18.14■□□□□ 0.5
USP49-202ENST00000373010 RSL24D1Q9UHA3 163 aaKnown RBP18.14■□□□□ 0.5
USP49-202ENST00000373010 GNGT2O14610 69 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 NOBOXO60393 691 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 ETHE1O95571 254 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 PRPS1L1P21108 318 aa18.14■□□□□ 0.49
USP49-202ENST00000373010 SHMT2P34897 504 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms