RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 CARD8Q9Y2G2 431 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 SPO11Q9Y5K1 396 aa13.55□□□□□ -0.24
COL6A1-201ENST00000361866 BTN3A3O00478 584 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 APOL3O95236 402 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CLTBP09497 229 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 ELNP15502 786 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 GABRR2P28476 465 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CD97P48960 835 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 HSPB3Q12988 150 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 SMN1Q16637 294 aaKnown RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF792Q3KQV3 632 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CYBRD1Q53TN4 286 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 KANK2Q63ZY3 851 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 GDF6Q6KF10 455 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 ANKRD13BQ86YJ7 626 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 C10orf53Q8N6V4 93 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 IPCEF1Q8WWN9 437 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 RPL3LQ92901 407 aaKnown RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 SH3YL1Q96HL8 342 aaPredicted RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CEP295NLQ96MC4 621 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TRNT1Q96Q11 434 aaKnown RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TMEM248Q9NWD8 314 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 EVPLQ92817 2033 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 AP1G1O43747 822 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CPNE3O75131 537 aaKnown RBP13.54□□□□□ -0.24
COL6A1-201ENST00000361866 PCDH8O95206 1070 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 STSP08842 583 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 NSG1P42857 185 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 FLT3LGP49771 235 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 ST3GAL4Q11206 333 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 FUT10Q6P4F1 479 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 BRI3BPQ8WY22 251 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TADA1Q96BN2 335 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TREX1Q9NSU2 369 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 VPS29Q9UBQ0 182 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 HTR3EA5X5Y0 456 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TRIM64CA6NLI5 447 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CCNB2O95067 398 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 GSRP00390 522 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 PSKH1P11801 424 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CENPAP49450 140 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 RCAN2Q14206 197 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 KCNA10Q16322 511 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 IQCCQ4KMZ1 466 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 DCST1Q5T197 706 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 MFSD6LQ8IWD5 586 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 TBC1D19Q8N5T2 526 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 DPP10Q8N608 796 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 OR8H1Q8NGG4 311 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 SUSD3Q96L08 255 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 SLC32A1Q9H598 525 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 LTB4R2Q9NPC1 389 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 ING3Q9NXR8 418 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 CFL2Q9Y281 166 aa13.54□□□□□ -0.24
COL6A1-201ENST00000361866 OR6C70A6NIJ9 312 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 NDUFB5O43674 189 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 MATN4O95460 622 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 RPLP2P05387 115 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 C7P10643 843 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CKMT1AP12532 417 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TNFRSF1BP20333 461 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TIE1P35590 1138 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ANXA11P50995 505 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ZXDBP98169 803 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 COL9A2Q14055 689 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 RAET1GQ6H3X3 334 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 FAM217AQ8IXS0 508 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 RAVER1Q8IY67 606 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TTC9BQ8N6N2 239 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 FCGR1BQ92637 280 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 PCDHGA11Q9Y5H2 935 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GPR45Q9Y5Y3 372 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 SPIN1Q9Y657 262 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 LAMB1P07942 1786 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 OXSR1O95747 527 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 PRKAR1AP10644 381 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 HOXD12P35452 270 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CSKP41240 450 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 MAPK8P45983 427 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ALDH3B2P48448 385 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 MVKQ03426 396 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GALNT1Q10472 559 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 APOFQ13790 326 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 UPP1Q16831 310 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 ZNF648Q5T619 568 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CXorf57Q6NSI4 855 aaKnown RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 SYCE2Q6PIF2 218 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 LAPTM4BQ86VI4 370 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 GHDCQ8N2G8 530 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 NCSTNQ92542 709 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 TEX37Q96LM6 180 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 NEK6Q9HC98 313 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 NLE1Q9NVX2 485 aaPredicted RBP13.53□□□□□ -0.24
COL6A1-201ENST00000361866 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 USP3Q9Y6I4 520 aa13.53□□□□□ -0.24
COL6A1-201ENST00000361866 H3BM21 787 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms