RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 AGAP4Q96P64 663 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 BRD9Q9H8M2 597 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 POLR3BQ9NW08 1133 aaPredicted RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 RDH8Q9NYR8 311 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 CLCA3PQ9Y6N3 262 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 NAV1Q8NEY1 1877 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 BMP4P12644 408 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 NUP62P37198 522 aaPredicted RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 GMFBP60983 142 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 BEX3Q00994 111 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 CSTF1Q05048 431 aaKnown RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 GRSF1Q12849 480 aaKnown RBP eCLIP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 WDR45BQ5MNZ6 344 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 PNPLA1Q8N8W4 532 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 MRGPRX2Q96LB1 330 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 NSUN3Q9H649 340 aaKnown RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 MARCH4Q9P2E8 410 aaPredicted RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 CACNG4Q9UBN1 327 aa15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 RUVBL1Q9Y265 456 aaKnown RBP15.59■□□□□ 0.09
CLSTN1-201ENST00000361311 GLYATL1P3A0A0U1RQE8 302 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 KLHL18O94889 574 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 CLEC14AQ86T13 490 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 TSPYL5Q86VY4 417 aaPredicted RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 OSTM1Q86WC4 334 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 DCP2Q8IU60 420 aaKnown RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 Q8N9G6 341 aaPredicted RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 OR52L1Q8NGH7 329 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 OLIG1Q8TAK6 271 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 CNDP2Q96KP4 475 aaKnown RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 ERMAPQ96PL5 475 aaPredicted RBP15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 PCYT2Q99447 389 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 ZSCAN5AQ9BUG6 496 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 CCDC32Q9BV29 185 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 GSDMCQ9BYG8 508 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 MS4A12Q9NXJ0 267 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 SLC25A13Q9UJS0 675 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 CACNA1SQ13698 1873 aa15.58■□□□□ 0.09
CLSTN1-201ENST00000361311 KHDRBS3O75525 346 aaKnown RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 C2orf80Q0P641 193 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 ALFQ53S48 1182 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF789Q5FWF6 425 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 FAM83DQ9H4H8 585 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 SIAEQ9HAT2 523 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 NFKBIL1Q9UBC1 381 aaPredicted RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 SEC14L4Q9UDX3 406 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 GTF2A1LQ9UNN4 478 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 SMIM35A0A1B0GVV1 85 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 TLR4O00206 839 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 PLD2O14939 933 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 NME6O75414 186 aaPredicted RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 ARSAP15289 507 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 MANFP55145 182 aaKnown RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 TAF10Q12962 218 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 SF3B4Q15427 424 aaKnown RBP eCLIP15.58■□□□□ 0.083e-7■■■■■ 34.3
CLSTN1-201ENST00000361311 KANK2Q63ZY3 851 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 KLRG1Q96E93 195 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 MYO19Q96H55 970 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 ACBD6Q9BR61 282 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 SLITRK2Q9H156 845 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 POPDC3Q9HBV1 291 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 PAK6Q9NQU5 681 aaPredicted RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 LOC730098B7Z3J9 87 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 GLUD1P00367 558 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 TACR2P21452 398 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 FOXA1P55317 472 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 TRNP1Q6NT89 227 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 AMIGO3Q86WK7 504 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 CEP295NLQ96MC4 621 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 MTERF1Q99551 399 aaKnown RBP15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 WACQ9BTA9 647 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 FLRT1Q9NZU1 646 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 CDH7Q9ULB5 785 aa15.58■□□□□ 0.08
CLSTN1-201ENST00000361311 INMT-MINDY4F8WBC2 141 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 OR4D1Q15615 310 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 SNAP47Q5SQN1 464 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 UBE2E3Q969T4 207 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 MSANTD3Q96H12 275 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 QRFPRQ96P65 431 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 ZBTB20Q9HC78 741 aaPredicted RBP15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 IL37Q9NZH6 218 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 ZNF451Q9Y4E5 1061 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 FGF4P08620 206 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 KCNA10Q16322 511 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 IDNKQ5T6J7 187 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 PAPD5Q8NDF8 572 aaKnown RBP15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 ZFP3Q96NJ6 502 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 CYP2S1Q96SQ9 504 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 NCKAP1Q9Y2A7 1128 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 BMP7P18075 431 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 MLLT6P55198 1093 aaPredicted RBP15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 NAE1Q13564 534 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 DUOXA1Q1HG43 343 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 KLHL22Q53GT1 634 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 SMOQ99835 787 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 TPT1P8Q9HAU6 139 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 MTMR10Q9NXD2 777 aa15.57■□□□□ 0.08
CLSTN1-201ENST00000361311 NT5C1B-RDH14C9J2C7 533 aa15.56■□□□□ 0.08
CLSTN1-201ENST00000361311 CLDN11O75508 207 aa15.56■□□□□ 0.08
CLSTN1-201ENST00000361311 ALDH2P05091 517 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms