RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 EME2A4GXA9 379 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 AGAP14A8MT82 685 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 F8W8V4 182 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 EIF3FO00303 357 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 EBAG9O00559 213 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PLD2O14939 933 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 STX7O15400 261 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CD3EAPO15446 510 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UGT1A9O60656 530 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PLIN3O60664 434 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 MT-CO1P00395 513 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 AHSGP02765 367 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CREB1P16220 341 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 TAC1P20366 129 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 RPS3P23396 243 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 SKIV2L2P42285 1042 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CCNHP51946 323 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 SLC12A2P55011 1212 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 RIPPLY3P57055 190 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 HNRNPKP61978 463 aaKnown RBP eCLIP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PLP2Q04941 152 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CACNG1Q06432 222 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 EIF3IQ13347 325 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 BMPR2Q13873 1038 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 GALNT3Q14435 633 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 DPY19L1Q2PZI1 675 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 POM121L1PQ3SYA9 428 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 FASTKD1Q53R41 847 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 AGBL4Q5VU57 503 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 KLC3Q6P597 504 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CRTC1Q6UUV9 634 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 LINGO4Q6UY18 593 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PIGWQ7Z7B1 504 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CPLX4Q7Z7G2 160 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 DSG4Q86SJ6 1040 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 GGNQ86UU5 652 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 TAX1BP1Q86VP1 789 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PTRH1Q86Y79 214 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UNC5BQ8IZJ1 945 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CACNA2D3Q8IZS8 1091 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 SLC22A18ASQ8N1D0 253 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 SLC25A41Q8N5S1 370 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ANKRD42Q8N9B4 389 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF548Q8NEK5 533 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 WDR48Q8TAF3 677 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ZNF473Q8WTR7 871 aaKnown RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 FRS2Q8WU20 508 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 HEXDCQ8WVB3 486 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 LPGAT1Q92604 370 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 KCNJ9Q92806 393 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 HDAC10Q969S8 669 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ULK4Q96C45 1275 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CDKN2AIPNLQ96HQ2 116 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PPP1R16AQ96I34 528 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 AGAP2Q99490 1192 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 HEPHQ9BQS7 1158 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 BDH2Q9BUT1 245 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UGT1A7Q9HAW7 530 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UGT1A10Q9HAW8 530 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 UGT1A8Q9HAW9 530 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PREBQ9HCU5 417 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 KCTD5Q9NXV2 234 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 IL17CQ9P0M4 197 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 HECAQ9UBI9 543 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 PLEKHB1Q9UF11 243 aaPredicted RBP6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ANAPC2Q9UJX6 822 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 TMCO1Q9UM00 188 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ERVW-1Q9UQF0 538 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 ACOT9Q9Y305 439 aa6.8□□□□□ -1.32
VPS13A-201ENST00000355766 CCDC162PA2VCL2 907 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CPED1A4D0V7 1026 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SH3D21A4FU49 640 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TMEM114B3SHH9 223 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TCP11X1B4DZS4 312 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 QSOX1O00391 747 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SMAD6O43541 496 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SNX3O60493 162 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 EDF1O60869 148 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SNNO75324 88 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 KLHL2O95198 593 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 WISP3O95389 354 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 GOT2P00505 430 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SERPINE1P05121 402 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 C2P06681 752 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 PYGLP06737 847 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 BPGMP07738 259 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 VIMP08670 466 aaKnown RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 RBP1P09455 135 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 SLC35E2BP0CK96 405 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 TROVE2P10155 538 aaKnown RBP eCLIP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 CYP2A6P11509 494 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 WT1P19544 449 aaPredicted RBP6.79□□□□□ -1.32
VPS13A-201ENST00000355766 ITGALP20701 1170 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 FDXRP22570 491 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 GABRB3P28472 473 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 AKT2P31751 481 aa6.79□□□□□ -1.32
VPS13A-201ENST00000355766 FOXN2P32314 431 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms