RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 DPYSQ14117 519 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 GPR68Q15743 365 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 CDKN3Q16667 212 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 DECR1Q16698 335 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
GABPA-201ENST00000354828 FAM174BQ3ZCQ3 159 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SPIN4Q56A73 249 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 PDSS1Q5T2R2 415 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ASPGQ86U10 573 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ZC3HC1Q86WB0 502 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 DHRSXQ8N5I4 330 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 KIFC1Q9BW19 673 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 IRF2BPLQ9H1B7 796 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ZNF358Q9NW07 568 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SAMD4AQ9UPU9 718 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 AP4S1Q9Y587 144 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 BTN3A3O00478 584 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 SCDO00767 359 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 POLR1CO15160 346 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 JUNP05412 331 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 RAB28P51157 221 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 KCNJ2P63252 427 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 ARHGAP8P85298 464 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 KLC1Q07866 573 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 EPS8Q12929 822 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 BROXQ5VW32 411 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 THAP3Q8WTV1 239 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 SLC25A36Q96CQ1 311 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 LRRC46Q96FV0 321 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 DPH7Q9BTV6 452 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 DNAAF2Q9NVR5 837 aaKnown RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 DKKL1Q9UK85 242 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 LY75O60449 1722 aa9.45□□□□□ -0.9
GABPA-201ENST00000354828 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
GABPA-201ENST00000354828 FOXO6A8MYZ6 492 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 TMX2-CTNND1H3BSU7 103 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 NPHS1O60500 1241 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 PCSK2P16519 638 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 IMPDH1P20839 514 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 SERPINB1P30740 379 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 GRK6P43250 576 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ACSBG2Q5FVE4 666 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 VWA5B1Q5TIE3 1220 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 DCAF12L1Q5VU92 463 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 DCP2Q8IU60 420 aaKnown RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 CSNK1A1LQ8N752 337 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 MMADHCQ9H3L0 296 aaPredicted RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 KCNK12Q9HB15 430 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ZNF229Q9UJW7 825 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 TPRKBQ9Y3C4 175 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 VSTM5A8MXK1 200 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 PCDHGA12O60330 932 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 TMCC2O75069 709 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 LDOC1O95751 146 aaPredicted RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 IFNW1P05000 195 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 HOXC13P31276 330 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 SOX6P35712 828 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 CLCN4P51793 760 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 RPS13P62277 151 aaKnown RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 ACY1Q03154 408 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 OASLQ15646 514 aaKnown RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 NAT6Q93015 286 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 SLC47A1Q96FL8 570 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 HOPXQ9BPY8 73 aaPredicted RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 TCHHQ07283 1943 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 MAST2Q6P0Q8 1798 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 MATN2O00339 956 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 GBAP04062 536 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 HRH2P25021 359 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 CXCR1P25024 350 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 CRISP3P54108 245 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 OR4D2P58180 307 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ACTR3P61158 418 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 GRIN2CQ14957 1233 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ZNF781Q8N8C0 355 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 RASSF5Q8WWW0 418 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 TSC22D3Q99576 134 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 CCDC28BQ9BUN5 200 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 SPATA9Q9BWV2 254 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 PAPOLBQ9NRJ5 636 aaKnown RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 HEMK1Q9Y5R4 338 aaPredicted RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 MYH6P13533 1939 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ELOA3DA6NLF2 546 aaPredicted RBP9.44□□□□□ -0.9
GABPA-201ENST00000354828 FAM25AB3EWG3 89 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 FAM25CB3EWG5 89 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 FAM25GB3EWG6 89 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 SNX3O60493 162 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 KCNJ13O60928 360 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 ALPPP05187 535 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 BPIP17213 487 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 HOXA9P31269 272 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 CTHP32929 405 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 HMGCLP35914 325 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 TALDO1P37837 337 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 IL12RB1P42701 662 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 NIPAL4Q0D2K0 466 aa9.44□□□□□ -0.9
GABPA-201ENST00000354828 COL9A2Q14055 689 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms