RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PCCBP05166 539 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 FGF4P08620 206 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 UROSP10746 265 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ADRB3P13945 408 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 EPB42P16452 691 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 MAGP20916 626 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 IL10P22301 178 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 PRKACGP22612 351 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 PSMA3P25788 255 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TGFBR1P36897 503 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 MMP12P39900 470 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 HALP42357 657 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 GPR1P46091 355 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 NUP107P57740 925 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 OR4D2P58180 307 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TRAF3Q13114 568 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 SELPLGQ14242 412 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 NFE2L1Q14494 772 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 HNRNPA1L2Q32P51 320 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 HENMT1Q5T8I9 393 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 PRAMEF9Q5VWM5 478 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ANKRD26P1Q6NSI1 321 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ERAP2Q6P179 960 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 METTL3Q86U44 580 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 DHRSXQ8N5I4 330 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 GLYATL1Q969I3 302 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ING2Q9H160 280 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 DYRK4Q9NR20 520 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 NDUFAF1Q9Y375 327 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM247A6NEH6 219 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ACOX3O15254 700 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ULK1O75385 1050 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 GSNP06396 782 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ANXA5P08758 320 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 EPORP19235 508 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 AGXTP21549 392 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 P2RY2P41231 377 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TPD52P55327 224 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 RELAQ04206 551 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 LIPEQ05469 1076 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 NAE1Q13564 534 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 DNASE1L3Q13609 305 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 CCDC85BQ15834 202 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TTLL9Q3SXZ7 439 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 CYBRD1Q53TN4 286 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 DCDC5Q6ZRR9 648 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 CLEC4FQ8N1N0 589 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ZBTB8BQ8NAP8 495 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 LEMD2Q8NC56 503 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 FBXO30Q8TB52 745 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 BTN2A2Q8WVV5 523 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 TMEM159Q96B96 161 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 SDCCAG3Q96C92 435 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 LRRC58Q96CX6 371 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 FAR2Q96K12 515 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 IL17FQ96PD4 163 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 CSF3RQ99062 836 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 KCTD14Q9BQ13 255 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 GPATCH1Q9BRR8 931 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 EBPLQ9BY08 206 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 MKRN2Q9H000 416 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 LHPPQ9H008 270 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ALG2Q9H553 416 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 PRSS16Q9NQE7 514 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 AGPAT4Q9NRZ5 378 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 CCM2LQ9NUG4 571 aaPredicted RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 KCTD5Q9NXV2 234 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 MSRAQ9UJ68 235 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 FBXO10Q9UK96 956 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 OARD1Q9Y530 152 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 DOCK9Q9BZ29 2069 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 ASPDHA6ND91 283 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 AGAP14A8MT82 685 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 STX16O14662 325 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 KLK8O60259 260 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 BMP10O95393 424 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CYP2A6P11509 494 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 NFKBIAP25963 317 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 RPS9P46781 194 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 EIF2B2P49770 351 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CCT8P50990 548 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 TFF2Q03403 129 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 GALNT1Q10472 559 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ELAVL3Q14576 367 aaKnown RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 STARD3Q14849 445 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 MAPRE2Q15555 327 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PGS1Q32NB8 556 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SLC36A3Q495N2 470 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ATAT1Q5SQI0 421 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 RGL4Q8IZJ4 473 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 CBARPQ8N350 705 aaPredicted RBP7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ANKFN1Q8N957 763 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 DDHD1Q8NEL9 900 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 PROKR1Q8TCW9 393 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 ASB11Q8WXH4 323 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 OR8D1Q8WZ84 308 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 SNX19Q92543 992 aa7.38□□□□□ -1.23
TRIM55-202ENST00000315962 OTUB2Q96DC9 234 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms