RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 LMNTD1Q8N9Z9 388 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 LKAAEAR1Q8TD35 194 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 TM9SF4Q92544 642 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 FKBP10Q96AY3 582 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 SNRNP40Q96DI7 357 aaKnown RBP7.81□□□□□ -1.16
TPM3-203ENST00000312970 C19orf60Q96EN9 201 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 FOPNLQ96NB1 174 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 IL17FQ96PD4 163 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 RAB11FIP5Q9BXF6 653 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 IL22Q9GZX6 179 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 P2RY12Q9H244 342 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 WDR54Q9H977 334 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 EIF2B3Q9NR50 452 aaKnown RBP7.81□□□□□ -1.16
TPM3-203ENST00000312970 ENAMQ9NRM1 1142 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 SLC22A11Q9NSA0 550 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 TREX1Q9NSU2 369 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 CUTCQ9NTM9 273 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 BFARQ9NZS9 450 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 MARCH4Q9P2E8 410 aaPredicted RBP7.81□□□□□ -1.16
TPM3-203ENST00000312970 CIDEBQ9UHD4 219 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 GNPTGQ9UJJ9 305 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 TTC7AQ9ULT0 858 aaPredicted RBP7.81□□□□□ -1.16
TPM3-203ENST00000312970 ANKRD12Q6UB98 2062 aa7.81□□□□□ -1.16
TPM3-203ENST00000312970 GOLGA6L6A8MZA4 724 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 DSCR3O14972 297 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 PFDN6O15212 129 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 SEMA7AO75326 666 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 C1orf105O95561 183 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 DDAH2O95865 285 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 RPS3P23396 243 aaKnown RBP eCLIP7.8□□□□□ -1.16
TPM3-203ENST00000312970 MMP11P24347 488 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 NMBRP28336 390 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 CCNFP41002 786 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 GLRBP48167 497 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 FOXL2P58012 376 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 CRADDP78560 199 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 BASP1P80723 227 aaKnown RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 MRPL49Q13405 166 aaKnown RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 SIX1Q15475 284 aaPredicted RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 NKG7Q16617 165 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 WASHC2DQ5SRD0 308 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 TAX1BP1Q86VP1 789 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 TTC29Q8NA56 475 aaPredicted RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 HMGCLL1Q8TB92 370 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 MAGEC3Q8TD91 643 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 SKA2Q8WVK7 121 aaPredicted RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 MAIP1Q8WWC4 291 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 VPS50Q96JG6 964 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 ZNF285Q96NJ3 590 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 TCF12Q99081 682 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 SELENOSQ9BQE4 189 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 KIFC1Q9BW19 673 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 ILKAPQ9H0C8 392 aaPredicted RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 SLC26A1Q9H2B4 701 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 ASF1BQ9NVP2 202 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 CDC23Q9UJX2 597 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 ZKSCAN5Q9Y2L8 839 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 COPG1Q9Y678 874 aaKnown RBP7.8□□□□□ -1.16
TPM3-203ENST00000312970 NFS1Q9Y697 457 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 PCSK5Q92824 1860 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 AKAP9Q99996 3911 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 FER1L5A0AVI2 2057 aa7.8□□□□□ -1.16
TPM3-203ENST00000312970 SNRNP200O75643 2136 aaKnown RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 HYKKA2RU49 373 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 FITM1A5D6W6 292 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 H3BMM5 538 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 MASP2O00187 686 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 CTSVO60911 334 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 VAPBO95292 243 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 MATN4O95460 622 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 CBX6O95503 412 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 RNF224P0DH78 156 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 CHRM3P20309 590 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 ITGAXP20702 1163 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 MCM3P25205 808 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 ITGA3P26006 1051 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 COL8A1P27658 744 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 FMO4P31512 558 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 SCTRP47872 440 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 OR1D4P47884 311 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 ST13P50502 369 aaKnown RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 MMP16P51512 607 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 EIF3BP55884 814 aaKnown RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 VSX2P58304 361 aaPredicted RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 SARNPP82979 210 aaKnown RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 CDK16Q00536 496 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 CCSMST1Q4G0I0 132 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 CRB2Q5IJ48 1285 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 LCE2DQ5TA82 110 aaPredicted RBP7.79□□□□□ -1.16
TPM3-203ENST00000312970 AGAP7PQ5VUJ5 663 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 PRAMEF13Q5VWM6 474 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 MRNIPQ6NTE8 343 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 FBXO42Q6P3S6 717 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 LRRC8BQ6P9F7 803 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 Q6ZS92 163 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 TMEM151BQ8IW70 566 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 OTUD6BQ8N6M0 293 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 OR2A1Q8NGT9 310 aa7.79□□□□□ -1.16
TPM3-203ENST00000312970 MFSD3Q96ES6 412 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms