RNA–Protein interactions for RNA: ENST00000309602.4

LRFN4-201, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN4, Length 2,431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-201ENST00000309602 PJA1Q8NG27 643 aa19.19■□□□□ 0.66
LRFN4-201ENST00000309602 CSGALNACT1Q8TDX6 532 aa19.19■□□□□ 0.66
LRFN4-201ENST00000309602 REXO4Q9GZR2 422 aaKnown RBP19.19■□□□□ 0.66
LRFN4-201ENST00000309602 ING2Q9H160 280 aa19.19■□□□□ 0.66
LRFN4-201ENST00000309602 ATXN10Q9UBB4 475 aa19.19■□□□□ 0.66
LRFN4-201ENST00000309602 E7EQ34 232 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 ZNF701M0R085 212 aaPredicted RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 PSIP1O75475 530 aaKnown RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 RHOP08100 348 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 PRKACGP22612 351 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 DCTP40126 519 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 PREPP48147 710 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 VAC14Q08AM6 782 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 UGT8Q16880 541 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 XKR6Q5GH73 641 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 KIAA0907Q7Z7F0 614 aaPredicted RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 SYT12Q8IV01 421 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 RAVER1Q8IY67 606 aaKnown RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 WDR20Q8TBZ3 569 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 GAB3Q8WWW8 586 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 NELL1Q92832 810 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 PYURFQ96I23 114 aa19.18■□□□□ 0.66
LRFN4-201ENST00000309602 MTERF1Q99551 399 aaKnown RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 RBM4BQ9BQ04 359 aaKnown RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 RBM4Q9BWF3 364 aaKnown RBP19.18■□□□□ 0.66
LRFN4-201ENST00000309602 TSPAN11A1L157 253 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 PRPS1L1P21108 318 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 DDX6P26196 483 aaKnown RBP eCLIP19.17■□□□□ 0.661e-9■■■■□ 21.9
LRFN4-201ENST00000309602 MAP4P27816 1152 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 WEE1P30291 646 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 NTHL1P78549 312 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 CBX2Q14781 532 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 GPR107Q5VW38 600 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 TTC23Q5W5X9 447 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ZNF773Q6PK81 442 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 MSANTD1Q6ZTZ1 278 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ADHFE1Q8IWW8 467 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 C8orf59Q8N0T1 100 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 RASGEF1AQ8N9B8 481 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 OR5K1Q8NHB7 308 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ZSCAN5AQ9BUG6 496 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ZBBXA8MT70 800 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 RECQL5O94762 991 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 IL7RP16871 459 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 PTPN2P17706 415 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 IL1RNP18510 177 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 EEF1B2P24534 225 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 WNT3P56703 355 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 CSTF3Q12996 717 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 NAE1Q13564 534 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 DDX39BQ13838 428 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 KCNC3Q14003 757 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 DOC2AQ14183 400 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 MYBPC3Q14896 1274 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 SF1Q15637 639 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 CHPFQ8IZ52 775 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ZNF366Q8N895 744 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 PNPT1Q8TCS8 783 aaKnown RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 BTN2A2Q8WVV5 523 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 TIFAQ96CG3 184 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 MAGEB10Q96LZ2 347 aaPredicted RBP19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ZSWIM3Q96MP5 696 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 ERVK-11Q9UQG0 969 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 PCDHGA8Q9Y5G5 932 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 LAMA3Q16787 3333 aa19.17■□□□□ 0.66
LRFN4-201ENST00000309602 UGDHO60701 494 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 ATE1O95260 518 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 BDKRB1P46663 353 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 KCNAB2Q13303 367 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 DUOXA1Q1HG43 343 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 SYTL3Q4VX76 610 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 ARHGAP15Q53QZ3 475 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 AGTRAPQ6RW13 159 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 TMEM26Q6ZUK4 368 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 TECPR1Q7Z6L1 1165 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 EID3Q8N140 333 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 ZNF557Q8N988 423 aaPredicted RBP19.16■□□□□ 0.66
LRFN4-201ENST00000309602 OR4K3Q96R72 315 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 STOX2Q9P2F5 926 aaPredicted RBP19.16■□□□□ 0.66
LRFN4-201ENST00000309602 NFKBIL1Q9UBC1 381 aaPredicted RBP19.16■□□□□ 0.66
LRFN4-201ENST00000309602 VPS29Q9UBQ0 182 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 IL36AQ9UHA7 158 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 U3KQV3 271 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 TMX2-CTNND1H3BSU7 103 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 FPGTO14772 594 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 HS6ST1O60243 411 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 SCN2BO60939 215 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 E2F6O75461 281 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 SYN1P17600 705 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 DCKP27707 260 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 TTKP33981 857 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 HNRNPFP52597 415 aaKnown RBP19.16■□□□□ 0.66
LRFN4-201ENST00000309602 HPCAP84074 193 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 SPIDRQ14159 915 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 ZNF284Q2VY69 593 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 DPPA4Q7L190 304 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 SGCDQ92629 289 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 CLP1Q92989 425 aaKnown RBP19.16■□□□□ 0.66
LRFN4-201ENST00000309602 MED8Q96G25 268 aa19.16■□□□□ 0.66
LRFN4-201ENST00000309602 PANX1Q96RD7 426 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms